Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00592 ATACATATGGCTAGTTTTCTTCCTGGTGATTCAACGCTTCATGGAATGTATGAAGGTGGTTCTTCTTCTCAGGACAAGTCTGAAGATGGTGCTCGATGGTACTTTTCCCGGAAGGAAATTGAAGAAAGTTCGCCATCTAAACAGGATGGGATTGATTTGAAAAAGGAGAGTTATCTACGCAAGTCATATTGTACCTTTTTGCAAGATCTGGGAATGAGGCTGAAAGTACCTCAGGTAACAATTGCTACGGCTATAATTTTCTGCCACCGGTTTTTTCTTCGACAATCCCTTGCAAAGAACGATAGAAGGACCATTGCAACCATATGCATGTTTCTTGCTGGGAAAGTAGAAGAAACTCCGCGTCCGCTGAAAGATGTTATCCTTGTTTCATATGAGATTATACATAAAAAGGATGCAGCCGCAGTTCAAAAGATCAAGCAAAAGGAGGTGTATGAACAGCAAAAAGAACTAATCTTACTTGGAGAGAGACTTGTTCTTGCAACTCTTGGTTTTGATCTTAATGTGCACCATCCCTACAAACCCCTCGTTGAGGCAATAAAAAAATTCAAAGTTGCTCAAAATGCCCTTGCACAAGTAGCATGGAATTTTGTTAATGATGGATTGAGGACATCTCTTTGCTTGCAATTTAAACCCCACCACATTGCTGCTGGTGCCATTTTCCTTGCTGCTAAGTTCCTTAAAGTAAAGCTCCCATCAGATGGGGAGAAGGTGTGGTGGCAAGAGTTTGATGTCACCCCACGTCAGTTGGAGGAAGTTAGCAACCAGATGTTGGAACTATACGAACAGAATCGAGTGCCACCTTCGAGTGAAGTTGATGGAAGCGCAATTGATGGATCTACCAATCGGATCTCTACTAAAGTTCCCACTAGCAGTGAAGAACACGTGCCAACACATAATCATTCACAGGCTGGAGGTACTTGCTCCAGATCTGCAACTTCTAAGCCGGGATCGTCAAGGCCGGCATGTGAACAATCATGTAAAGATCTTCATAGCGAGCCTCAGCGACCCAATCGGAGTCAAAGTAGTGAAAACGGGAGTATGGAGATGAAACATTATGTGAATCTCAAAGAAGATGGTGACTATAAACTAAATCCATATCATGAATCAGAGCCGCCCTTGCCTTCTCAGGACAGCATGAGTAAAGTTCAGAATTTGTCAAAGTTTTGGTCGGAGAGATTGGACGAACAAAATCAAGAAAGCAGTTTGAGAACTAATGAAGCAAGAGAAGCAGTGGACTTGAAGGATAAACATGCGAGCAGAGGAGTAGAGGATAAAGATGGTGCAATTCGGTGGTCACCTCGGGACGTAATAAAAAAGATTGATAAGGACAAGGTAAAGGCGGCATTGGAGAAACGGAGGAAGTCCCTTGGTGGTGTCACTCGGAAAACAGAATCAATGGACGAAGATGATCTCATCGAGAGGGAGCTCGAAGCTGGCATTGAACTGGCTGCCGAAAGTGAGAAAAATAAACGAGAGGTAAGGCAAGGTTGGGCTAAGTCGTCGAATAGACCAGAATATGAGGATTTGCATCAAGAAAGGGATAGAGATGACCGTCGCCAAGGAGTGATAGGACAATCAAATTATGGGCCTGATTTAAATAACATGGAAGAAGGGGAGTTATCAATTACTAATGATCCTGGCATAGAATATCAATCCCCAAAGTCAGGAAGCCGCAAACGAAAGGCTGGGAGCCCACCCGACAAAGTGTTTGAGGGGAAGCAGTGGCAAGATTCATTGGCTGCATCTCACCGAGATAAGCACTCTGATTATATGGGAGATGGAAACAGTGTAGGTCGGGTTCGTCACGTCGACAGGGACCACAAGCGGCATGTTCAAGAAAATCATGTATGA 1872 43.86 IHMASFLPGDSTLHGMYEGGSSSQDKSEDGARWYFSRKEIEESSPSKQDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSLAKNDRRTIATICMFLAGKVEETPRPLKDVILVSYEIIHKKDAAAVQKIKQKEVYEQQKELILLGERLVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVPPSSEVDGSAIDGSTNRISTKVPTSSEEHVPTHNHSQAGGTCSRSATSKPGSSRPACEQSCKDLHSEPQRPNRSQSSENGSMEMKHYVNLKEDGDYKLNPYHESEPPLPSQDSMSKVQNLSKFWSERLDEQNQESSLRTNEAREAVDLKDKHASRGVEDKDGAIRWSPRDVIKKIDKDKVKAALEKRRKSLGGVTRKTESMDEDDLIERELEAGIELAAESEKNKREVRQGWAKSSNRPEYEDLHQERDRDDRRQGVIGQSNYGPDLNNMEEGELSITNDPGIEYQSPKSGSRKRKAGSPPDKVFEGKQWQDSLAASHRDKHSDYMGDGNSVGRVRHVDRDHKRHVQENHV 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 26227960 26234838 + Bma007761.1 Bma12g00592 92018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00592 623 MobiDBLite consensus disorder prediction 533 558 - -
Bma12g00592 623 Pfam Cyclin, N-terminal domain 34 174 IPR006671 -
Bma12g00592 623 CDD CYCLIN 174 235 IPR013763 -
Bma12g00592 623 PIRSF Cyclin_L 31 486 - -
Bma12g00592 623 PIRSF Cyclin_L 391 622 - -
Bma12g00592 623 PANTHER - 4 528 - -
Bma12g00592 623 SMART cyclin_7 65 167 IPR013763 -
Bma12g00592 623 SMART cyclin_7 180 265 IPR013763 -
Bma12g00592 623 MobiDBLite consensus disorder prediction 489 623 - -
Bma12g00592 623 CDD CYCLIN 59 130 IPR013763 -
Bma12g00592 623 MobiDBLite consensus disorder prediction 268 354 - -
Bma12g00592 623 MobiDBLite consensus disorder prediction 268 327 - -
Bma12g00592 623 PANTHER CYCLIN 4 528 IPR043198 GO:0006357|GO:0016538
Bma12g00592 623 MobiDBLite consensus disorder prediction 585 623 - -
Bma12g00592 623 MobiDBLite consensus disorder prediction 489 528 - -
Bma12g00592 623 SUPERFAMILY Cyclin-like 29 175 IPR036915 -
Bma12g00592 623 MobiDBLite consensus disorder prediction 400 433 - -
Bma12g00592 623 SUPERFAMILY Cyclin-like 176 272 IPR036915 -
Bma12g00592 623 MobiDBLite consensus disorder prediction 367 388 - -
Bma12g00592 623 Gene3D - 175 278 - -
Bma12g00592 623 Gene3D - 20 173 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00793 Bma-Chr4:9020235 Bma12g00592 Bma-Chr12:26227960 2.97E-38 dispersed
Bma11g00438 Bma-Chr11:4841654 Bma12g00592 Bma-Chr12:26227960 4.61E-141 dispersed
Bma12g00592 Bma-Chr12:26227960 Bma07g00425 Bma-Chr7:5201650 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00592 K15188 - vvi:100265067 800.816