Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00600 ATGAACGACGCAGATGTATCTAAGCAGATCCAGCAGATGGTGAGGTTTATCCGCCAGGAAGCGGAGGAAAAGGCGAACGAGATCTCTGTTTCTGCCGAAGAAGAATTCAACATCGAGAAGTTGCAACTGGTTGAGGCAGAAAAGAAGAAGATCAGACAAGAGTACGAGAAAAAGGAGAAGCAAGTCGACGTTCGGAAAAAGATTGAGTATTCCATGCAGCTTAATGCTTCTAGAATTAAAGTTCTCCAAGCCCAAGATGATGTCGTCAACTCCATGAAAGAAGCAGCATCAAAGGAACTTCTAAGCATCTGCCGTGATCAGCATGGATACAAAAATCTCTTGAAAGATCTCATAGTTCAGAGCTTGCTTCGACTGAAAGAGCCAGCTGTATTGCTGCGATGTCGGGAAGATGACCGTCAATTGGTTGAGAATGTGCTACAATCTGCAGCGAAGGAATATGCTCAAAAAGCAAGTGTTCATCCTCCCGAAATTATAGTTGACACTCGTGTCTTTCTACCGCCTGCTCCAACCCACTACGATGCTCATGGTCCATATTGCTCTGGAGGTGTGGTGCTGGCATCTCGAGATGGAAAGATTGTTTGTGAGAACACCCTTGACGCAAGGTTGGATGTTGCATTTCGTAAAAAACTTCCAGAGGTA 660 45.0 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVDVRKKIEYSMQLNASRIKVLQAQDDVVNSMKEAASKELLSICRDQHGYKNLLKDLIVQSLLRLKEPAVLLRCREDDRQLVENVLQSAAKEYAQKASVHPPEIIVDTRVFLPPAPTHYDAHGPYCSGGVVLASRDGKIVCENTLDARLDVAFRKKLPEV 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 27319223 27322824 - Bma030506 Bma12g00600 92026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00600 220 Coils Coil 38 61 - -
Bma12g00600 220 Pfam ATP synthase (E/31 kDa) subunit 16 220 IPR002842 GO:0033178|GO:0046961|GO:1902600
Bma12g00600 220 SUPERFAMILY V-type ATPase subunit E-like 87 220 - -
Bma12g00600 220 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 218 IPR002842 GO:0033178|GO:0046961|GO:1902600
Bma12g00600 220 Gene3D - 92 220 IPR038495 -
Bma12g00600 220 PANTHER BNAC03G72900D PROTEIN 1 218 - -
Bma12g00600 220 Gene3D - 1 62 - -
Bma12g00600 220 Hamap V-type proton ATPase subunit E [atpE]. 8 220 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00848 Bma12g00600 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00052 Bma-Chr12:1081180 Bma12g00600 Bma-Chr12:27319223 1.92E-160 wgd
Bma12g00600 Bma-Chr12:27319223 Bma05g00848 Bma-Chr5:46031662 8.59E-145 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00600 K02150 - pvy:116145342 378.252