Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00626 ATGTGCAGAATGGTCAAGGCAAGATTGGGCAGATGGTTAAATCTAGTACTGTCTCTGCTAATTTTGTTGAGGGGTGAAGGGTTTAATGTGGATATAACTTATGTTCAGAGTGCAATTGCCAAAGGAGCTGTTTGTCTGGATGGAAGTCCGCCGGCTTACCACTTCAGTCCTGGATTCGGATCTGGAATCAATAATTGGTTGCTTCAAATCGAGGGTGGAGGATGGTGTAACAATGTGGCTACTTGCCTTGCTCGAAAGACCACTCGACTAGGTTCATCCAAGGCGATGGTCAAACAACTCGCATTCTCGGGAATTTTGAGCAACAATAAAAAATCCAATCCGGACTTTTACGATTGGAACAAAGTCAAGGTTCGGTACTGCGACGGATCTTCTTTTACCGGTGACGTCGAAGCTGTGGATCCAGCTACCAATCTTCATTTCAGAGGAGCAAGGGTCTGGCTTGCCATTGTTGAGGATCTATTAGCTAGAGGGATGAAAAATGCTAAAAATGCTATTCTCTCAGGTTGCTCTGCTGGTGGTTTGACTTCTATTTTGCACTGTGATAACTTCAGATCTCTCCTCCCATCTGCCACTGTTAAATGCCTGGCAGATGCCGGATTTTTTATCAATGCGAAGGATGTGTCTGGAGCTCAACATATTGAATCGTTCTATAGCAACGTGGTGGAAACTCATAATTCGGCGAAGAATTTGCCTGCATCCTGCACTTCGAAACTAAGCCCGGGGTTGGTGAGTATGGGTTTCTTTGTTTGGGCAATATGGTTTTGTTTCGATTTTATTCTATGTTTCTTGCAGTGCTTCTTCCCGCAAAATGTCGCCCCGACTATCCAAACCCCTCTTTTTCTCGTAAATGCGGCATATGATTCGTGGCAGATCAAGAATATTTTAGCGCCCGGGGTTGCTGATCCGCACGGCCTTTGGCGCAACTGCAAGCTTGACATCAAAAGCTGTTCCTCCAGCCAACTTAAAACCATGCAAGCTTACAGATTGGAGTTCTTAGACGCGATAAAAAGTGTAAGCGCCTCTCCATCGAATGGAATGTTTATCGACTCTTGCTACGCCCACTGCCAGACCGGAGTGCAAGAAACCTGGCTTAGAGTCGATTCTACCGTGCTTAACAACACGACGATCGGAAAGGCCGTCGGAGACTGGTTTTTCGACAGAAATACATTCCGAACGATAGATTGCGCTTACCCTTGCAACCCGACTTGCCATAATCGTATTTTCGAATCTTGA 1254 45.69 MCRMVKARLGRWLNLVLSLLILLRGEGFNVDITYVQSAIAKGAVCLDGSPPAYHFSPGFGSGINNWLLQIEGGGWCNNVATCLARKTTRLGSSKAMVKQLAFSGILSNNKKSNPDFYDWNKVKVRYCDGSSFTGDVEAVDPATNLHFRGARVWLAIVEDLLARGMKNAKNAILSGCSAGGLTSILHCDNFRSLLPSATVKCLADAGFFINAKDVSGAQHIESFYSNVVETHNSAKNLPASCTSKLSPGLVSMGFFVWAIWFCFDFILCFLQCFFPQNVAPTIQTPLFLVNAAYDSWQIKNILAPGVADPHGLWRNCKLDIKSCSSSQLKTMQAYRLEFLDAIKSVSASPSNGMFIDSCYAHCQTGVQETWLRVDSTVLNNTTIGKAVGDWFFDRNTFRTIDCAYPCNPTCHNRIFES 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 27503088 27505550 + Bma007802.1 Bma12g00626 92052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00626 417 Pfam Pectinacetylesterase 26 396 IPR004963 GO:0016787
Bma12g00626 417 SUPERFAMILY alpha/beta-Hydrolases 136 296 IPR029058 -
Bma12g00626 417 PANTHER PECTIN ACETYLESTERASE 272 415 - -
Bma12g00626 417 PANTHER PECTIN ACETYLESTERASE 10 250 - -
Bma12g00626 417 PANTHER NOTUM-RELATED 10 250 IPR004963 GO:0016787
Bma12g00626 417 PANTHER NOTUM-RELATED 272 415 IPR004963 GO:0016787
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00898 Bma12g00626 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00647 Bma-Chr1:5828563 Bma12g00626 Bma-Chr12:27503088 3.76E-141 dispersed
Bma12g00626 Bma-Chr12:27503088 Bma12g00632 Bma-Chr12:27585398 0 proximal
Bma01g01870 Bma-Chr1:68613085 Bma12g00626 Bma-Chr12:27503088 4.53E-135 transposed
Bma12g00626 Bma-Chr12:27503088 Bma05g00898 Bma-Chr5:46826758 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00626 K19882 - zju:107430580 642.499