Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00712 ATGAAAACGAAGAGGACCACGGCCGCCGGAGAAGCTGAGATGGTAGAAGTCCAAGGAACCCATATTCTCCGACCAACTGACGGGAGAGACCGACACAGCAAGATCTACACCGCCAAAGGACCTCGAGACCGCCGGGTTCGGCTATCAGCTCACACTGCCATACAATTCTACGACGTTCAAGATCGGTTAGGCTATGATAGACCTAGCAAAGCAGTTGATTGGCTAATCACAAAGGCTAAATCCTCCATTGATAAGCTCTCAGAGCCTCAACCATCTTCTATGGGCGAAGATCTGAAATCGAATTCAACTGGTTATAGCTTTCAGCTTCACGGTCGTTCGAACGAAGGGAATAATCGCTCTAACGCAATTCTGCCTCTTGATCTCGACTCCATGAAAGCATGCTTCCCCACTAGCTCGGCAGAAAACTTCATTAATTTTCAGACCTACCCGTCGAATTTAATTTCTCAAACCGTTGGTTCCTCCAAAGATCTCGATCTCTCTCTTCAAACTTTCAAAAACGTCGGCATGGTTCTGGCTGAACACTCATCTGAAAGCGAGGGTAACCTCTTCTCCGACTCATCTCCGGCAGGACTTGAAGCTTTTTGTAGGAGAATGGTGGATTGGAACAGTGACAAAAGTGCAGAGCACGGAGGTGGGTTTGTTTTTCCCACCCCATCCATGCCTCAGCCACCGTCGTTAGGCCAAGCCTCGCCGGCGTTTCCTCCGAGAGAAACCCTTCAACCCACTGCGTTGTTTGATATTCCTACGCCGCATTATGGCACTCGGACGGAAATTCAGGCTGATGACGAGCAGGGTACTGTTTCGGAGAGGTTGTCGTCGTCGTCTTCCCCGATTTCGCATCATCTGCAAAGGAACGTATAG 882 49.55 MKTKRTTAAGEAEMVEVQGTHILRPTDGRDRHSKIYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLITKAKSSIDKLSEPQPSSMGEDLKSNSTGYSFQLHGRSNEGNNRSNAILPLDLDSMKACFPTSSAENFINFQTYPSNLISQTVGSSKDLDLSLQTFKNVGMVLAEHSSESEGNLFSDSSPAGLEAFCRRMVDWNSDKSAEHGGGFVFPTPSMPQPPSLGQASPAFPPRETLQPTALFDIPTPHYGTRTEIQADDEQGTVSERLSSSSSPISHHLQRNV 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 31865208 31866089 - Bma007927.1 Bma12g00712 92138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00712 293 Pfam TCP family transcription factor 28 108 IPR017887 -
Bma12g00712 293 MobiDBLite consensus disorder prediction 226 245 - -
Bma12g00712 293 MobiDBLite consensus disorder prediction 252 293 - -
Bma12g00712 293 MobiDBLite consensus disorder prediction 272 293 - -
Bma12g00712 293 ProSiteProfiles TCP domain profile. 28 86 IPR017887 -
Bma12g00712 293 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 6 254 IPR005333 GO:0003700
Bma12g00712 293 PANTHER TRANSCRIPTION FACTOR TCP10 6 254 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma08g00546 Bma12g00712 CCT
Bma08g00546 Bma12g00712 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00483 Bma-Chr10:5711482 Bma12g00712 Bma-Chr12:31865208 1.41E-43 dispersed
Bma12g00712 Bma-Chr12:31865208 Bma14g00261 Bma-Chr14:3077685 3.20E-40 dispersed
Bma12g00712 Bma-Chr12:31865208 Bma08g00546 Bma-Chr8:33039404 4.97E-69 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58129 PF03634 TCP 1.30E-30 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00712 - - qsu:112040076 237.269