Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00720 ATGGCCTACTCCAAAGATCGCGAGAGCTTGGTCTACCTTGCCAAGCTTGCTGAACAGGCAGAACGTTACGATGAGATGGTGGAAGCTATGAAGAGTGTTGCAAAGCTTGATGTTGAATTAACAGTTGAAGAGCGCAATTTACTCTCTGTTGGGTATAAGAATGTTGTTGGTGCCCGGAGAGCCTCATGGAGGATTTTATCATCAATAGAGCAGAAGGAAGAAGCTAAAGGGAATGAAGCGAATGCCAAAAGAATAAAGGGATATCGTCACAAGGTTGAATCAGAGCTCTCAACAATTTGTGGTGATATTATGACTGTGATTGATGAGCATTTAATTCCTTCAGCCTCCGCTGGTGAATCAACAGTATTCTACTTTAAGATGAAAGGAGACTATTATCGGTATCTAGCGGAATTCAAATCTGGTAATGAGAAGAAAGAGGATGCTGATCAATCAATGAAAGCTTATGAGGCTGCAACTGTCTCTGCAGAAGCTGATTTGCCGCCTACACATCCCATACGATTGGGTTTGGCATTGAATTTCTCTGTTTTTTATTATGAGATCATGAATTCACCTGAAAGGGCCTGCCACCTTGCTAAGCAAGCTTTTGATGAAGCTATTTCCGAGCTTGATACTCTTAATGAGGAATCATACAAGGACAGCACCTTAATTATGCAGCTTCTTAGAGACAATTTGACCTTATGGACTTCTGACATTCCCGAGGATGGAGATGATTCTCAGAAGATCAATGGCACCACAAAGATCGTCGGGTTAGATGCTGCAGAGTGA 786 42.24 MAYSKDRESLVYLAKLAEQAERYDEMVEAMKSVAKLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNEANAKRIKGYRHKVESELSTICGDIMTVIDEHLIPSASAGESTVFYFKMKGDYYRYLAEFKSGNEKKEDADQSMKAYEAATVSAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGDDSQKINGTTKIVGLDAAE 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 32286893 32304721 - Bma007938.1 Bma12g00720 92146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00720 261 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Bma12g00720 261 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Bma12g00720 261 SMART 1433_4 7 248 IPR023410 -
Bma12g00720 261 Coils Coil 13 33 - -
Bma12g00720 261 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Bma12g00720 261 Pfam 14-3-3 protein 13 235 IPR023410 -
Bma12g00720 261 Coils Coil 195 215 - -
Bma12g00720 261 PANTHER 14-3-3 PROTEIN 3 247 IPR000308 -
Bma12g00720 261 Gene3D - 1 249 IPR036815 -
Bma12g00720 261 PIRSF 14-3-3 1 247 IPR000308 -
Bma12g00720 261 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Bma12g00720 261 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Bma12g00720 261 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Bma12g00720 261 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Bma12g00720 261 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Bma12g00720 261 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Bma12g00720 261 PANTHER BNAC03G57490D PROTEIN 3 247 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g01000 Bma-Chr11:45385981 Bma12g00720 Bma-Chr12:32286893 1.25E-152 dispersed
Bma12g00720 Bma-Chr12:32286893 Bma14g01663 Bma-Chr14:35272720 1.77E-149 dispersed
Bma12g00720 Bma-Chr12:32286893 Bma02g01394 Bma-Chr2:56212509 2.30E-177 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00720 K06630 - csv:101208446 462.225