Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma12g00731 | ATGGGTTGTGTATATACTAAGCCTTTGGCTGTTGAAGACAGCCTGAAAGACGGATTGAAAGAACATAAAGTTCCGGGCTCGAATTCAGCAAGAGCAGAAGAGATTATTCGATTGAAATCGACGAGAAAAGAAGAGGAAATTCGATTGAATTCATTGAGAAGTGAAGAGGGTGTTCGATCAAAAGCGAAATTCGATCGAGGCGATGAGAAAGTTTCATCATTTGGCCGAGAAGGTAATGTTTTGACAGGAATTCATGACGACCAAACAGAAAAGAAGAAGAGGGAAATGGTAAAATCTGTCGTTTCTGATTATCCTGGGAAAGGAAGAGTTCCCATGGCTGCAGAAGGAGAGCAAGTTGCTGCTGGGTGGCCGAGTTGGCTCGCGGCTGTGGCCAGCGAGGCGATAAAGGGATGGATTCCTCGGCGGGCGGATACTTTCCAGAAGCTAGAAAAAATTGGGCAGGGAACTTATAGCAGTGTTTACAAGGCTCAAGATCTAATTCACGGTAAATTAGTAGCTTTAAAGAGAGTGAAATTTGATAATCTCGACATCGAAAGTGTGAAGTTTATGGCAAGGGAAATCCTTATTTTGCGCCGGCTCAACCATCCAAATATCATTAAACTAGAAGGCTTAATTACAACCCCAAGGTCTTGCAGCTTGTACCTTGTTTTCGAGTACATGGAACACGACCTTATGGGATTGGCATCACGTCCAGGAGTCAAATTCACAGAACCGCAGATTAAATGTTATATGCAACATCTTCTACGGGGGCTCGATTACTGTCACAATCAGGGGGTCTTGCATCGTGACATTAAGGGCTCAAATCTTCTTATCGATGACAAGGGGCATTTGAAGATTGCAGATTTTGGTTTAGCGAGTTTTCACGACCATGATAATGGTGTTCCTTTGACGACTCGGGTAGTGACACTTTGGTATAGACCACCTGAGCTCTTACTTGGAATTTCCCATTATGGAGTTGCAGTCGATCTGTGGAGCGTTGGTTGTATTCTGGCAGAGCTTTACACTGGAAAGCCATTTTTACCAGGAAAAACTGAGGTTGAACAACTGCATAAGATATTCAAGCTTTGTGGGTCGCCATCAGAGGATTATTGGAGGAAATTGCAGCTGCCTCATTCGACGGTTTTTAAGCCGGCACATCCATATCAAAGATGTGTAGCTGAGTTGCTCAAGGAATATCCCCCTGCCGCAGTGGCACTTGTTGACACTTTGCTGTCTATCGAGCCTGCCAAGCGAGGAACTGCAGCCAGTGTTTTGAAAAGTCAGTTCTTTACTTCAAAACCTTTCGCCTGTGATCCGTCGAGTTTGCCTAAATATCCTCCTAGCAAAGAGATCGACTCGAAAATGCGGGATGCGATCAGAAGACAGGAAAAGGCAGGAGGCAAGAGTCAGAATGTCAACGGGGAAGGCAGACAAGGTAGAAAATCAAATGATTATGTCGTCTACGATGCTAAACTCGTATTTGGAGAGCCACCATTGAGACGACGTGGCCATTCGAGCTCCGTAAGTAGAAGTGAGCAGCCAGTTTCAGGTTTTCTCATAGCTCCGCCAAAACAAACTAAGGTGACAAAGGAAGAAAGTAGAGAGTCGAGCTCGAAGAGGCTTTCGCATTCAGGACCGTTGATAAATGAACCTCCATGGATAAAACCAAGTGAAGAACCTACTCCTTTGCCAACCAGAGCCAGCTTGTCAACACTCTCTGGCCTGGTTGCAAAACGGATTTCTATGTCCGAAGACCACAGAAATCAAGCAGCTCCTCCACATCCAAACCCCATTAATCATCGTCTGAAATCGCCCGAATTGATAATTGAGATGGAGTTGACGAGAAAGCATGATCGGAATCGGTATACACACAGAGTTGCAGATTCTTATCAGATTGAAAATCAAAGGGCCCATGCTAAAGAGCCGACCTCGCATTATCACGGGGCTAAGGCCAACAAAATCTACATATCCGGGCCGATTCTAGGTCCATCCGACAATGTGGAACAAATTCTTAAAGAACGAGACAGACAGATTCAAGAATTCGCAAGACCAGCTCGAAACGGTAAATTTCAGCTAGTAACTGGGGCCAGAACGCATGCATCTAAACGTGGAGCATGA | 2118 | 45.04 | MGCVYTKPLAVEDSLKDGLKEHKVPGSNSARAEEIIRLKSTRKEEEIRLNSLRSEEGVRSKAKFDRGDEKVSSFGREGNVLTGIHDDQTEKKKREMVKSVVSDYPGKGRVPMAAEGEQVAAGWPSWLAAVASEAIKGWIPRRADTFQKLEKIGQGTYSSVYKAQDLIHGKLVALKRVKFDNLDIESVKFMAREILILRRLNHPNIIKLEGLITTPRSCSLYLVFEYMEHDLMGLASRPGVKFTEPQIKCYMQHLLRGLDYCHNQGVLHRDIKGSNLLIDDKGHLKIADFGLASFHDHDNGVPLTTRVVTLWYRPPELLLGISHYGVAVDLWSVGCILAELYTGKPFLPGKTEVEQLHKIFKLCGSPSEDYWRKLQLPHSTVFKPAHPYQRCVAELLKEYPPAAVALVDTLLSIEPAKRGTAASVLKSQFFTSKPFACDPSSLPKYPPSKEIDSKMRDAIRRQEKAGGKSQNVNGEGRQGRKSNDYVVYDAKLVFGEPPLRRRGHSSSVSRSEQPVSGFLIAPPKQTKVTKEESRESSSKRLSHSGPLINEPPWIKPSEEPTPLPTRASLSTLSGLVAKRISMSEDHRNQAAPPHPNPINHRLKSPELIIEMELTRKHDRNRYTHRVADSYQIENQRAHAKEPTSHYHGAKANKIYISGPILGPSDNVEQILKERDRQIQEFARPARNGKFQLVTGARTHASKRGA | 705 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 33462028 | 33465167 | - | Bma007967.1 | Bma12g00731 | 92157 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma12g00731 | 705 | Gene3D | Phosphorylase Kinase; domain 1 | 133 | 228 | - | - | |
Bma12g00731 | 705 | PANTHER | CELL DIVISION PROTEIN KINASE | 95 | 689 | - | - | |
Bma12g00731 | 705 | ProSitePatterns | Protein kinases ATP-binding region signature. | 152 | 175 | IPR017441 | GO:0005524 | |
Bma12g00731 | 705 | CDD | STKc_CDK9_like | 146 | 430 | - | - | |
Bma12g00731 | 705 | SUPERFAMILY | Protein kinase-like (PK-like) | 140 | 436 | IPR011009 | - | |
Bma12g00731 | 705 | MobiDBLite | consensus disorder prediction | 461 | 481 | - | - | |
Bma12g00731 | 705 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 266 | 278 | IPR008271 | GO:0004672|GO:0006468 | |
Bma12g00731 | 705 | Gene3D | Transferase(Phosphotransferase) domain 1 | 229 | 470 | - | - | |
Bma12g00731 | 705 | MobiDBLite | consensus disorder prediction | 497 | 567 | - | - | |
Bma12g00731 | 705 | Coils | Coil | 35 | 55 | - | - | |
Bma12g00731 | 705 | Pfam | Protein kinase domain | 146 | 430 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma12g00731 | 705 | PANTHER | CYCLIN-DEPENDENT KINASE | 95 | 689 | - | - | |
Bma12g00731 | 705 | ProSiteProfiles | Protein kinase domain profile. | 146 | 430 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma12g00731 | 705 | SMART | serkin_6 | 146 | 430 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma12g00731 | Bma-Chr12:33462028 | Bma14g00238 | Bma-Chr14:2878166 | 0 | dispersed | |
Bma12g00731 | Bma-Chr12:33462028 | Bma12g00732 | Bma-Chr12:33566462 | 0 | tandem | |
Bma01g02517 | Bma-Chr1:82820724 | Bma12g00731 | Bma-Chr12:33462028 | 4.47E-136 | transposed | |
Bma04g00318 | Bma-Chr4:2543533 | Bma12g00731 | Bma-Chr12:33462028 | 0 | transposed | |
Bma12g00731 | Bma-Chr12:33462028 | Bma02g01380 | Bma-Chr2:56137511 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66817 | PF00069 | Pkinase | 2.10E-67 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma12g00731 | - | - | csv:101207826 | 810.061 |