Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00731 ATGGGTTGTGTATATACTAAGCCTTTGGCTGTTGAAGACAGCCTGAAAGACGGATTGAAAGAACATAAAGTTCCGGGCTCGAATTCAGCAAGAGCAGAAGAGATTATTCGATTGAAATCGACGAGAAAAGAAGAGGAAATTCGATTGAATTCATTGAGAAGTGAAGAGGGTGTTCGATCAAAAGCGAAATTCGATCGAGGCGATGAGAAAGTTTCATCATTTGGCCGAGAAGGTAATGTTTTGACAGGAATTCATGACGACCAAACAGAAAAGAAGAAGAGGGAAATGGTAAAATCTGTCGTTTCTGATTATCCTGGGAAAGGAAGAGTTCCCATGGCTGCAGAAGGAGAGCAAGTTGCTGCTGGGTGGCCGAGTTGGCTCGCGGCTGTGGCCAGCGAGGCGATAAAGGGATGGATTCCTCGGCGGGCGGATACTTTCCAGAAGCTAGAAAAAATTGGGCAGGGAACTTATAGCAGTGTTTACAAGGCTCAAGATCTAATTCACGGTAAATTAGTAGCTTTAAAGAGAGTGAAATTTGATAATCTCGACATCGAAAGTGTGAAGTTTATGGCAAGGGAAATCCTTATTTTGCGCCGGCTCAACCATCCAAATATCATTAAACTAGAAGGCTTAATTACAACCCCAAGGTCTTGCAGCTTGTACCTTGTTTTCGAGTACATGGAACACGACCTTATGGGATTGGCATCACGTCCAGGAGTCAAATTCACAGAACCGCAGATTAAATGTTATATGCAACATCTTCTACGGGGGCTCGATTACTGTCACAATCAGGGGGTCTTGCATCGTGACATTAAGGGCTCAAATCTTCTTATCGATGACAAGGGGCATTTGAAGATTGCAGATTTTGGTTTAGCGAGTTTTCACGACCATGATAATGGTGTTCCTTTGACGACTCGGGTAGTGACACTTTGGTATAGACCACCTGAGCTCTTACTTGGAATTTCCCATTATGGAGTTGCAGTCGATCTGTGGAGCGTTGGTTGTATTCTGGCAGAGCTTTACACTGGAAAGCCATTTTTACCAGGAAAAACTGAGGTTGAACAACTGCATAAGATATTCAAGCTTTGTGGGTCGCCATCAGAGGATTATTGGAGGAAATTGCAGCTGCCTCATTCGACGGTTTTTAAGCCGGCACATCCATATCAAAGATGTGTAGCTGAGTTGCTCAAGGAATATCCCCCTGCCGCAGTGGCACTTGTTGACACTTTGCTGTCTATCGAGCCTGCCAAGCGAGGAACTGCAGCCAGTGTTTTGAAAAGTCAGTTCTTTACTTCAAAACCTTTCGCCTGTGATCCGTCGAGTTTGCCTAAATATCCTCCTAGCAAAGAGATCGACTCGAAAATGCGGGATGCGATCAGAAGACAGGAAAAGGCAGGAGGCAAGAGTCAGAATGTCAACGGGGAAGGCAGACAAGGTAGAAAATCAAATGATTATGTCGTCTACGATGCTAAACTCGTATTTGGAGAGCCACCATTGAGACGACGTGGCCATTCGAGCTCCGTAAGTAGAAGTGAGCAGCCAGTTTCAGGTTTTCTCATAGCTCCGCCAAAACAAACTAAGGTGACAAAGGAAGAAAGTAGAGAGTCGAGCTCGAAGAGGCTTTCGCATTCAGGACCGTTGATAAATGAACCTCCATGGATAAAACCAAGTGAAGAACCTACTCCTTTGCCAACCAGAGCCAGCTTGTCAACACTCTCTGGCCTGGTTGCAAAACGGATTTCTATGTCCGAAGACCACAGAAATCAAGCAGCTCCTCCACATCCAAACCCCATTAATCATCGTCTGAAATCGCCCGAATTGATAATTGAGATGGAGTTGACGAGAAAGCATGATCGGAATCGGTATACACACAGAGTTGCAGATTCTTATCAGATTGAAAATCAAAGGGCCCATGCTAAAGAGCCGACCTCGCATTATCACGGGGCTAAGGCCAACAAAATCTACATATCCGGGCCGATTCTAGGTCCATCCGACAATGTGGAACAAATTCTTAAAGAACGAGACAGACAGATTCAAGAATTCGCAAGACCAGCTCGAAACGGTAAATTTCAGCTAGTAACTGGGGCCAGAACGCATGCATCTAAACGTGGAGCATGA 2118 45.04 MGCVYTKPLAVEDSLKDGLKEHKVPGSNSARAEEIIRLKSTRKEEEIRLNSLRSEEGVRSKAKFDRGDEKVSSFGREGNVLTGIHDDQTEKKKREMVKSVVSDYPGKGRVPMAAEGEQVAAGWPSWLAAVASEAIKGWIPRRADTFQKLEKIGQGTYSSVYKAQDLIHGKLVALKRVKFDNLDIESVKFMAREILILRRLNHPNIIKLEGLITTPRSCSLYLVFEYMEHDLMGLASRPGVKFTEPQIKCYMQHLLRGLDYCHNQGVLHRDIKGSNLLIDDKGHLKIADFGLASFHDHDNGVPLTTRVVTLWYRPPELLLGISHYGVAVDLWSVGCILAELYTGKPFLPGKTEVEQLHKIFKLCGSPSEDYWRKLQLPHSTVFKPAHPYQRCVAELLKEYPPAAVALVDTLLSIEPAKRGTAASVLKSQFFTSKPFACDPSSLPKYPPSKEIDSKMRDAIRRQEKAGGKSQNVNGEGRQGRKSNDYVVYDAKLVFGEPPLRRRGHSSSVSRSEQPVSGFLIAPPKQTKVTKEESRESSSKRLSHSGPLINEPPWIKPSEEPTPLPTRASLSTLSGLVAKRISMSEDHRNQAAPPHPNPINHRLKSPELIIEMELTRKHDRNRYTHRVADSYQIENQRAHAKEPTSHYHGAKANKIYISGPILGPSDNVEQILKERDRQIQEFARPARNGKFQLVTGARTHASKRGA 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 33462028 33465167 - Bma007967.1 Bma12g00731 92157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00731 705 Gene3D Phosphorylase Kinase; domain 1 133 228 - -
Bma12g00731 705 PANTHER CELL DIVISION PROTEIN KINASE 95 689 - -
Bma12g00731 705 ProSitePatterns Protein kinases ATP-binding region signature. 152 175 IPR017441 GO:0005524
Bma12g00731 705 CDD STKc_CDK9_like 146 430 - -
Bma12g00731 705 SUPERFAMILY Protein kinase-like (PK-like) 140 436 IPR011009 -
Bma12g00731 705 MobiDBLite consensus disorder prediction 461 481 - -
Bma12g00731 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Bma12g00731 705 Gene3D Transferase(Phosphotransferase) domain 1 229 470 - -
Bma12g00731 705 MobiDBLite consensus disorder prediction 497 567 - -
Bma12g00731 705 Coils Coil 35 55 - -
Bma12g00731 705 Pfam Protein kinase domain 146 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma12g00731 705 PANTHER CYCLIN-DEPENDENT KINASE 95 689 - -
Bma12g00731 705 ProSiteProfiles Protein kinase domain profile. 146 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma12g00731 705 SMART serkin_6 146 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00731 Bma-Chr12:33462028 Bma14g00238 Bma-Chr14:2878166 0 dispersed
Bma12g00731 Bma-Chr12:33462028 Bma12g00732 Bma-Chr12:33566462 0 tandem
Bma01g02517 Bma-Chr1:82820724 Bma12g00731 Bma-Chr12:33462028 4.47E-136 transposed
Bma04g00318 Bma-Chr4:2543533 Bma12g00731 Bma-Chr12:33462028 0 transposed
Bma12g00731 Bma-Chr12:33462028 Bma02g01380 Bma-Chr2:56137511 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66817 PF00069 Pkinase 2.10E-67 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00731 - - csv:101207826 810.061