Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00732 ATGGGTTGCATATGGTCTAAGGTTTTTTCTGTCGAAGACAGCCATGAAGCTTCGAAAACAAATTCTACGGCAAACACGTATTTCTCAGAACTTCCTTTTTCTTCCTACTATTCTTCGAAAATCAACGAGGATATTCAGCAAAAAAGGAAATTGGATCTTAGAGAGGGGTCAGTATATTTAAATGGCGACCAAATTGAGAGGAAAAAGACAGAAGTTTCAGCTCCTGATCATCCCTGTCTGGGAAGCATTCCCAAAGCTGCAGAGGCTGAGCAGATCGCTGCGGGGTGGCCTCCATGGTTAGCCAAGGCAGCAGGCGAAGCTTTCAAAGGATGGATACCTCGGCAGTCGAACACTTTCGAAAAGCTAAATAAAATTGGTCAAGGTACTTACAGCAGTGTTTATCGAGCTCGAGACGTGCGAGAGAACAAAATCGTCGCCTTGAAAAGGGTACGATTCGACAATCACGATACCACAAGCATCAAATTTATGGCAAGGGAAATCGTCGTTTTGCGTCGACTCGATCATCCAAACATAATAAAATTGGAAGGCATAATCACATCTCAGTCATCTTGTACCATATACCTAATTTTCGAGTATATGGAACATGATCTTACTGGATTAACCACTTGTCCTGGAGTGAAGTTTACAGAGCCTCAGGTGAAATGTTATATGCAGCAACTTTTGAGCGGACTCGACCATTGTCATAGTCGCGGAATTCTTCATCGAGACATAAAGGGTTCGAATCTCCTGATCGACAACAATGGGATCTTGAAAATTGCTGATTTTGGATTAGCCATCTTTTTTGATCCCCAGAAGGCGGTTCAAATGACTAGCAGAGTGATAACTCTGTGGTATCGACCGCCAGAACTTTTACTCGGAGCATCTCAGTATGGGGTTGGTGTGGATTTATGGAGCACTGGCTGTATCTTAGGAGAGTTGTATGCTGGCAAGCCTATCTTGCCTGGAAAAACAGAGGTTGAACAGCTGCATAAGATCTTTAAACTTTGCGGCTCACCGCCGGACGATTACTGGAATAAACTGGAATCACGACATTCGATAGCGATGAAACCTCTGACGACGTATTTACGACGTCTCAGAGATACGTTCCAAGATTTTCCTACTCCTGCTCTAAACCTTGTCGATACCTTACTCTCTGTCGATCCTGCAGAGCGAGGAACTGCAGCCGAAGCCCTCAAGAGTGAGTTCTTCACGAGAAGCCCTCTTGCGTGTGATCCTTGGTGTTTGCCGAAATATTCTCCTTCCAAAGAGATTGATGCAAAGTTGTGGGATGAAGAAGCAAGAAGGAAGGGAGTTTTCGGCATGAAAGGCCGAGTAGTTGAGCTAGAAAGGAGAGAACAAAAGGTGCCGGGGGAAGTCAAGGCTGCTGAGTTAGCCAATTTAATGCAGAAAGTTAGAGAAGGCCAATCGAACTCGAAGATGCAAAATGGAATGAATAGGCCTCGAGGTCAAGTTGTTTCTCCTTTCCCGATTGGCCGACAAACTGGATTCTCGCATTCGGGACCCCTAATTCACAAACCAAAATGTGTCAAATCTCGATATGAATATCGTGATGCCTTTAAAGATTCGAGCAACTTTTCAACTAAGCCAGCCGAAATTGATCAAGCTATTCCTCATCGTTCATCAGCCAAATCGACAAATCAAGTTACCGATGCAACTGATGTCCAAGCTGGTAGGGAACAGGAAAGAACACATCACCGTGATAGAAACAAAGACGATCATCATGTAGAAGATGAAATTGCCTGCATCAAGGAGCCATCTCTGCATGGACGTGGACCGAAGGGAAACCAAATCTACGTATCAGAGTCATTTCTTGTTACGTCAAGTAACGTCAACAGGATGTTTAAAGTACACGAGTGCCGCATCCGAGAATACACTCGACAAGCGCGAGTTGACAAGGGCAAACTAGAAAACACATAG 1938 44.43 MGCIWSKVFSVEDSHEASKTNSTANTYFSELPFSSYYSSKINEDIQQKRKLDLREGSVYLNGDQIERKKTEVSAPDHPCLGSIPKAAEAEQIAAGWPPWLAKAAGEAFKGWIPRQSNTFEKLNKIGQGTYSSVYRARDVRENKIVALKRVRFDNHDTTSIKFMAREIVVLRRLDHPNIIKLEGIITSQSSCTIYLIFEYMEHDLTGLTTCPGVKFTEPQVKCYMQQLLSGLDHCHSRGILHRDIKGSNLLIDNNGILKIADFGLAIFFDPQKAVQMTSRVITLWYRPPELLLGASQYGVGVDLWSTGCILGELYAGKPILPGKTEVEQLHKIFKLCGSPPDDYWNKLESRHSIAMKPLTTYLRRLRDTFQDFPTPALNLVDTLLSVDPAERGTAAEALKSEFFTRSPLACDPWCLPKYSPSKEIDAKLWDEEARRKGVFGMKGRVVELERREQKVPGEVKAAELANLMQKVREGQSNSKMQNGMNRPRGQVVSPFPIGRQTGFSHSGPLIHKPKCVKSRYEYRDAFKDSSNFSTKPAEIDQAIPHRSSAKSTNQVTDATDVQAGREQERTHHRDRNKDDHHVEDEIACIKEPSLHGRGPKGNQIYVSESFLVTSSNVNRMFKVHECRIREYTRQARVDKGKLENT 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 33566462 33569217 - Bma007968.1 Bma12g00732 92158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00732 645 MobiDBLite consensus disorder prediction 545 561 - -
Bma12g00732 645 Pfam Protein kinase domain 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma12g00732 645 Gene3D Phosphorylase Kinase; domain 1 114 206 - -
Bma12g00732 645 Gene3D Transferase(Phosphotransferase) domain 1 207 439 - -
Bma12g00732 645 PANTHER CELL DIVISION PROTEIN KINASE 69 555 - -
Bma12g00732 645 MobiDBLite consensus disorder prediction 562 583 - -
Bma12g00732 645 MobiDBLite consensus disorder prediction 539 583 - -
Bma12g00732 645 SMART serkin_6 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma12g00732 645 SUPERFAMILY Protein kinase-like (PK-like) 114 408 IPR011009 -
Bma12g00732 645 ProSiteProfiles Protein kinase domain profile. 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma12g00732 645 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 69 555 - -
Bma12g00732 645 CDD STKc_CDK9_like 119 403 - -
Bma12g00732 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Bma12g00732 645 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g01380 Bma12g00732 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01380 Bma-Chr2:56137511 Bma12g00732 Bma-Chr12:33566462 0 dispersed
Bma12g00732 Bma-Chr12:33566462 Bma14g00238 Bma-Chr14:2878166 0 dispersed
Bma12g00731 Bma-Chr12:33462028 Bma12g00732 Bma-Chr12:33566462 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66818 PF00069 Pkinase 6.60E-68 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00732 - - mnt:21388284 687.952