Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma12g00732 | ATGGGTTGCATATGGTCTAAGGTTTTTTCTGTCGAAGACAGCCATGAAGCTTCGAAAACAAATTCTACGGCAAACACGTATTTCTCAGAACTTCCTTTTTCTTCCTACTATTCTTCGAAAATCAACGAGGATATTCAGCAAAAAAGGAAATTGGATCTTAGAGAGGGGTCAGTATATTTAAATGGCGACCAAATTGAGAGGAAAAAGACAGAAGTTTCAGCTCCTGATCATCCCTGTCTGGGAAGCATTCCCAAAGCTGCAGAGGCTGAGCAGATCGCTGCGGGGTGGCCTCCATGGTTAGCCAAGGCAGCAGGCGAAGCTTTCAAAGGATGGATACCTCGGCAGTCGAACACTTTCGAAAAGCTAAATAAAATTGGTCAAGGTACTTACAGCAGTGTTTATCGAGCTCGAGACGTGCGAGAGAACAAAATCGTCGCCTTGAAAAGGGTACGATTCGACAATCACGATACCACAAGCATCAAATTTATGGCAAGGGAAATCGTCGTTTTGCGTCGACTCGATCATCCAAACATAATAAAATTGGAAGGCATAATCACATCTCAGTCATCTTGTACCATATACCTAATTTTCGAGTATATGGAACATGATCTTACTGGATTAACCACTTGTCCTGGAGTGAAGTTTACAGAGCCTCAGGTGAAATGTTATATGCAGCAACTTTTGAGCGGACTCGACCATTGTCATAGTCGCGGAATTCTTCATCGAGACATAAAGGGTTCGAATCTCCTGATCGACAACAATGGGATCTTGAAAATTGCTGATTTTGGATTAGCCATCTTTTTTGATCCCCAGAAGGCGGTTCAAATGACTAGCAGAGTGATAACTCTGTGGTATCGACCGCCAGAACTTTTACTCGGAGCATCTCAGTATGGGGTTGGTGTGGATTTATGGAGCACTGGCTGTATCTTAGGAGAGTTGTATGCTGGCAAGCCTATCTTGCCTGGAAAAACAGAGGTTGAACAGCTGCATAAGATCTTTAAACTTTGCGGCTCACCGCCGGACGATTACTGGAATAAACTGGAATCACGACATTCGATAGCGATGAAACCTCTGACGACGTATTTACGACGTCTCAGAGATACGTTCCAAGATTTTCCTACTCCTGCTCTAAACCTTGTCGATACCTTACTCTCTGTCGATCCTGCAGAGCGAGGAACTGCAGCCGAAGCCCTCAAGAGTGAGTTCTTCACGAGAAGCCCTCTTGCGTGTGATCCTTGGTGTTTGCCGAAATATTCTCCTTCCAAAGAGATTGATGCAAAGTTGTGGGATGAAGAAGCAAGAAGGAAGGGAGTTTTCGGCATGAAAGGCCGAGTAGTTGAGCTAGAAAGGAGAGAACAAAAGGTGCCGGGGGAAGTCAAGGCTGCTGAGTTAGCCAATTTAATGCAGAAAGTTAGAGAAGGCCAATCGAACTCGAAGATGCAAAATGGAATGAATAGGCCTCGAGGTCAAGTTGTTTCTCCTTTCCCGATTGGCCGACAAACTGGATTCTCGCATTCGGGACCCCTAATTCACAAACCAAAATGTGTCAAATCTCGATATGAATATCGTGATGCCTTTAAAGATTCGAGCAACTTTTCAACTAAGCCAGCCGAAATTGATCAAGCTATTCCTCATCGTTCATCAGCCAAATCGACAAATCAAGTTACCGATGCAACTGATGTCCAAGCTGGTAGGGAACAGGAAAGAACACATCACCGTGATAGAAACAAAGACGATCATCATGTAGAAGATGAAATTGCCTGCATCAAGGAGCCATCTCTGCATGGACGTGGACCGAAGGGAAACCAAATCTACGTATCAGAGTCATTTCTTGTTACGTCAAGTAACGTCAACAGGATGTTTAAAGTACACGAGTGCCGCATCCGAGAATACACTCGACAAGCGCGAGTTGACAAGGGCAAACTAGAAAACACATAG | 1938 | 44.43 | MGCIWSKVFSVEDSHEASKTNSTANTYFSELPFSSYYSSKINEDIQQKRKLDLREGSVYLNGDQIERKKTEVSAPDHPCLGSIPKAAEAEQIAAGWPPWLAKAAGEAFKGWIPRQSNTFEKLNKIGQGTYSSVYRARDVRENKIVALKRVRFDNHDTTSIKFMAREIVVLRRLDHPNIIKLEGIITSQSSCTIYLIFEYMEHDLTGLTTCPGVKFTEPQVKCYMQQLLSGLDHCHSRGILHRDIKGSNLLIDNNGILKIADFGLAIFFDPQKAVQMTSRVITLWYRPPELLLGASQYGVGVDLWSTGCILGELYAGKPILPGKTEVEQLHKIFKLCGSPPDDYWNKLESRHSIAMKPLTTYLRRLRDTFQDFPTPALNLVDTLLSVDPAERGTAAEALKSEFFTRSPLACDPWCLPKYSPSKEIDAKLWDEEARRKGVFGMKGRVVELERREQKVPGEVKAAELANLMQKVREGQSNSKMQNGMNRPRGQVVSPFPIGRQTGFSHSGPLIHKPKCVKSRYEYRDAFKDSSNFSTKPAEIDQAIPHRSSAKSTNQVTDATDVQAGREQERTHHRDRNKDDHHVEDEIACIKEPSLHGRGPKGNQIYVSESFLVTSSNVNRMFKVHECRIREYTRQARVDKGKLENT | 645 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 33566462 | 33569217 | - | Bma007968.1 | Bma12g00732 | 92158 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma12g00732 | 645 | MobiDBLite | consensus disorder prediction | 545 | 561 | - | - | |
Bma12g00732 | 645 | Pfam | Protein kinase domain | 119 | 403 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma12g00732 | 645 | Gene3D | Phosphorylase Kinase; domain 1 | 114 | 206 | - | - | |
Bma12g00732 | 645 | Gene3D | Transferase(Phosphotransferase) domain 1 | 207 | 439 | - | - | |
Bma12g00732 | 645 | PANTHER | CELL DIVISION PROTEIN KINASE | 69 | 555 | - | - | |
Bma12g00732 | 645 | MobiDBLite | consensus disorder prediction | 562 | 583 | - | - | |
Bma12g00732 | 645 | MobiDBLite | consensus disorder prediction | 539 | 583 | - | - | |
Bma12g00732 | 645 | SMART | serkin_6 | 119 | 403 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma12g00732 | 645 | SUPERFAMILY | Protein kinase-like (PK-like) | 114 | 408 | IPR011009 | - | |
Bma12g00732 | 645 | ProSiteProfiles | Protein kinase domain profile. | 119 | 403 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma12g00732 | 645 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 69 | 555 | - | - | |
Bma12g00732 | 645 | CDD | STKc_CDK9_like | 119 | 403 | - | - | |
Bma12g00732 | 645 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 239 | 251 | IPR008271 | GO:0004672|GO:0006468 | |
Bma12g00732 | 645 | ProSitePatterns | Protein kinases ATP-binding region signature. | 125 | 148 | IPR017441 | GO:0005524 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma02g01380 | Bma12g00732 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g01380 | Bma-Chr2:56137511 | Bma12g00732 | Bma-Chr12:33566462 | 0 | dispersed | |
Bma12g00732 | Bma-Chr12:33566462 | Bma14g00238 | Bma-Chr14:2878166 | 0 | dispersed | |
Bma12g00731 | Bma-Chr12:33462028 | Bma12g00732 | Bma-Chr12:33566462 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66818 | PF00069 | Pkinase | 6.60E-68 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma12g00732 | - | - | mnt:21388284 | 687.952 |