Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00748 ATGGGGGGTTGTATATCCACGAGTAGTCATAGTAGTTGCAGTAGCACAAGCAATGGGGAAGCAGTTTCTTCTTCCTGCCTAGGTTTAGTGGTTTATGATCAGCAGAGAAGCAAGAGAACGTTTTCCGATCGAATTGTTTCCCCTCATCATTCAGCCTCGATGTCGAGCCGGATCGTCACCAATGGAAAGACTCCGACTGCTTGCATTTTCACCCAACAGGGTCGCAAGGGAATTAACCAGGATGCCATGATTGTGTGGGAAGAGTTTATGTCTGGAGATGTAACGTTTTGTGGTGTTTTTGATGGTCATGGGCCACACGGCCATCTAGTTGCTCGGAAAGTTAGAGATGCTTTACCGAAAAAGCTTCTATCGTTCTTGCTTTCTTCCCAATCGAAGCAGAATGGATCTGGTCGAGACTGTTTCAACAGGAAATCCAAGAATGGAGAAGATGGAGATGCAGAGAAGGATGCTTCAGCAGAAGATAAATCGGATTCTGCATGGAGGGAAGCATTCCTCAGGTCATACAAAGCCATGGATAAGGAGCTAAGATCCCATCCAAATCTGGACTGTTTCTGCAGTGGCAGTACTGCCGTGACTATAATCAAACAGGGCTCGAATCTGTTCATGGGAAATATCGGGGATTCTCGAGCGATTCTTGGATCACAGGGAAGTGACGATTCCATGGTGGCAATCCAATTGACTGTTGATCTGAAGCCTGATTTGCCCAGAGAAGCTGAAAGGATAAAACAATGCAAAGGTAGAGTCTTTGCATTGCAGGATGAGCCTGAAGTGCCAAGAGTCTGGCTGCCATTTGACGATGCACCCGGGCTAGCCATGGCTCGAGCTTTCGGCGATTTCTGTTTGAAGGAATATGGTGTGATCTCTATACCAGAATTCTCTCATCGAGTACTCACAAACAAAGATCAGTTCATCGTTCTCGCCTCAGATGGGGTATGGGATGTGTTGAGTAATGAGGAGGTGGTGGGGATTGTGTCTACGGCTCCTACAAGGTCGTCAGCTGCGAGAGTCCTGGTCGACAAAGCCGCCCAAGAATGGAAGCTCAAATACCCAACTTCGAAGATGGACGATTGTGCAGTCGTTTGCCTATTTCTGGACGGAAAAATGGACTCTGAATCAGATTACGATGAACAAGGTTCTTCATCTGTAATTCTTCAAAGAGATCATTCTGGCAACGGTATGATCGAATCAGACGGTACCCAGAAGAGTGAGCCAACTTTGCGACGAAACGACACTGTCCGATCATCAGGAGACGAGGAAACTTCGGAGAAATTGCCAGTGGAAGCGGAACAAAGAGTTGCAGCTGAAGATCAGAACTGGTCAGGTTTGGAAGGGGTGACAAGAGTGAACTCACTGGTCCAGCTACCTAGATTTTCTCAAGAAAGGCTAAAGCCTTGA 1416 47.03 MGGCISTSSHSSCSSTSNGEAVSSSCLGLVVYDQQRSKRTFSDRIVSPHHSASMSSRIVTNGKTPTACIFTQQGRKGINQDAMIVWEEFMSGDVTFCGVFDGHGPHGHLVARKVRDALPKKLLSFLLSSQSKQNGSGRDCFNRKSKNGEDGDAEKDASAEDKSDSAWREAFLRSYKAMDKELRSHPNLDCFCSGSTAVTIIKQGSNLFMGNIGDSRAILGSQGSDDSMVAIQLTVDLKPDLPREAERIKQCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRVLTNKDQFIVLASDGVWDVLSNEEVVGIVSTAPTRSSAARVLVDKAAQEWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGSSSVILQRDHSGNGMIESDGTQKSEPTLRRNDTVRSSGDEETSEKLPVEAEQRVAAEDQNWSGLEGVTRVNSLVQLPRFSQERLKP 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 34361091 34362835 + Bma007988.2 Bma12g00748 92174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00748 471 MobiDBLite consensus disorder prediction 131 161 - -
Bma12g00748 471 SMART PP2C_4 55 369 IPR001932 -
Bma12g00748 471 Pfam Protein phosphatase 2C 136 349 IPR001932 -
Bma12g00748 471 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 459 - -
Bma12g00748 471 ProSiteProfiles PPM-type phosphatase domain profile. 66 371 IPR001932 -
Bma12g00748 471 CDD PP2Cc 67 371 IPR001932 -
Bma12g00748 471 MobiDBLite consensus disorder prediction 393 407 - -
Bma12g00748 471 Gene3D - 59 379 IPR036457 -
Bma12g00748 471 MobiDBLite consensus disorder prediction 393 444 - -
Bma12g00748 471 MobiDBLite consensus disorder prediction 1 21 - -
Bma12g00748 471 PANTHER ALPHABET, ISOFORM E-RELATED 1 459 - -
Bma12g00748 471 MobiDBLite consensus disorder prediction 142 161 - -
Bma12g00748 471 SUPERFAMILY PP2C-like 64 373 IPR036457 -
Bma12g00748 471 MobiDBLite consensus disorder prediction 408 437 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma08g00589 Bma12g00748 CCT
Bma02g01365 Bma12g00748 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00748 Bma-Chr12:34361091 Bma13g00370 Bma-Chr13:6866969 1.66E-153 dispersed
Bma12g00748 Bma-Chr12:34361091 Bma02g01365 Bma-Chr2:56054974 0 wgd
Bma12g00748 Bma-Chr12:34361091 Bma08g00589 Bma-Chr8:36747947 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00748 - - zju:107416642 723.391