Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma12g00748 | ATGGGGGGTTGTATATCCACGAGTAGTCATAGTAGTTGCAGTAGCACAAGCAATGGGGAAGCAGTTTCTTCTTCCTGCCTAGGTTTAGTGGTTTATGATCAGCAGAGAAGCAAGAGAACGTTTTCCGATCGAATTGTTTCCCCTCATCATTCAGCCTCGATGTCGAGCCGGATCGTCACCAATGGAAAGACTCCGACTGCTTGCATTTTCACCCAACAGGGTCGCAAGGGAATTAACCAGGATGCCATGATTGTGTGGGAAGAGTTTATGTCTGGAGATGTAACGTTTTGTGGTGTTTTTGATGGTCATGGGCCACACGGCCATCTAGTTGCTCGGAAAGTTAGAGATGCTTTACCGAAAAAGCTTCTATCGTTCTTGCTTTCTTCCCAATCGAAGCAGAATGGATCTGGTCGAGACTGTTTCAACAGGAAATCCAAGAATGGAGAAGATGGAGATGCAGAGAAGGATGCTTCAGCAGAAGATAAATCGGATTCTGCATGGAGGGAAGCATTCCTCAGGTCATACAAAGCCATGGATAAGGAGCTAAGATCCCATCCAAATCTGGACTGTTTCTGCAGTGGCAGTACTGCCGTGACTATAATCAAACAGGGCTCGAATCTGTTCATGGGAAATATCGGGGATTCTCGAGCGATTCTTGGATCACAGGGAAGTGACGATTCCATGGTGGCAATCCAATTGACTGTTGATCTGAAGCCTGATTTGCCCAGAGAAGCTGAAAGGATAAAACAATGCAAAGGTAGAGTCTTTGCATTGCAGGATGAGCCTGAAGTGCCAAGAGTCTGGCTGCCATTTGACGATGCACCCGGGCTAGCCATGGCTCGAGCTTTCGGCGATTTCTGTTTGAAGGAATATGGTGTGATCTCTATACCAGAATTCTCTCATCGAGTACTCACAAACAAAGATCAGTTCATCGTTCTCGCCTCAGATGGGGTATGGGATGTGTTGAGTAATGAGGAGGTGGTGGGGATTGTGTCTACGGCTCCTACAAGGTCGTCAGCTGCGAGAGTCCTGGTCGACAAAGCCGCCCAAGAATGGAAGCTCAAATACCCAACTTCGAAGATGGACGATTGTGCAGTCGTTTGCCTATTTCTGGACGGAAAAATGGACTCTGAATCAGATTACGATGAACAAGGTTCTTCATCTGTAATTCTTCAAAGAGATCATTCTGGCAACGGTATGATCGAATCAGACGGTACCCAGAAGAGTGAGCCAACTTTGCGACGAAACGACACTGTCCGATCATCAGGAGACGAGGAAACTTCGGAGAAATTGCCAGTGGAAGCGGAACAAAGAGTTGCAGCTGAAGATCAGAACTGGTCAGGTTTGGAAGGGGTGACAAGAGTGAACTCACTGGTCCAGCTACCTAGATTTTCTCAAGAAAGGCTAAAGCCTTGA | 1416 | 47.03 | MGGCISTSSHSSCSSTSNGEAVSSSCLGLVVYDQQRSKRTFSDRIVSPHHSASMSSRIVTNGKTPTACIFTQQGRKGINQDAMIVWEEFMSGDVTFCGVFDGHGPHGHLVARKVRDALPKKLLSFLLSSQSKQNGSGRDCFNRKSKNGEDGDAEKDASAEDKSDSAWREAFLRSYKAMDKELRSHPNLDCFCSGSTAVTIIKQGSNLFMGNIGDSRAILGSQGSDDSMVAIQLTVDLKPDLPREAERIKQCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRVLTNKDQFIVLASDGVWDVLSNEEVVGIVSTAPTRSSAARVLVDKAAQEWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGSSSVILQRDHSGNGMIESDGTQKSEPTLRRNDTVRSSGDEETSEKLPVEAEQRVAAEDQNWSGLEGVTRVNSLVQLPRFSQERLKP | 471 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 34361091 | 34362835 | + | Bma007988.2 | Bma12g00748 | 92174 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma12g00748 | 471 | MobiDBLite | consensus disorder prediction | 131 | 161 | - | - | |
Bma12g00748 | 471 | SMART | PP2C_4 | 55 | 369 | IPR001932 | - | |
Bma12g00748 | 471 | Pfam | Protein phosphatase 2C | 136 | 349 | IPR001932 | - | |
Bma12g00748 | 471 | PANTHER | PROTEIN PHOSPHATASE 2C 52-RELATED | 1 | 459 | - | - | |
Bma12g00748 | 471 | ProSiteProfiles | PPM-type phosphatase domain profile. | 66 | 371 | IPR001932 | - | |
Bma12g00748 | 471 | CDD | PP2Cc | 67 | 371 | IPR001932 | - | |
Bma12g00748 | 471 | MobiDBLite | consensus disorder prediction | 393 | 407 | - | - | |
Bma12g00748 | 471 | Gene3D | - | 59 | 379 | IPR036457 | - | |
Bma12g00748 | 471 | MobiDBLite | consensus disorder prediction | 393 | 444 | - | - | |
Bma12g00748 | 471 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bma12g00748 | 471 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 459 | - | - | |
Bma12g00748 | 471 | MobiDBLite | consensus disorder prediction | 142 | 161 | - | - | |
Bma12g00748 | 471 | SUPERFAMILY | PP2C-like | 64 | 373 | IPR036457 | - | |
Bma12g00748 | 471 | MobiDBLite | consensus disorder prediction | 408 | 437 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma08g00589 | Bma12g00748 | CCT | |
Bma02g01365 | Bma12g00748 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma12g00748 | Bma-Chr12:34361091 | Bma13g00370 | Bma-Chr13:6866969 | 1.66E-153 | dispersed | |
Bma12g00748 | Bma-Chr12:34361091 | Bma02g01365 | Bma-Chr2:56054974 | 0 | wgd | |
Bma12g00748 | Bma-Chr12:34361091 | Bma08g00589 | Bma-Chr8:36747947 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma12g00748 | - | - | zju:107416642 | 723.391 |