Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00764 ATGGGAAGAGCTCCTTGCTGTGTCAAAAATGGACTGAAGAAAGGGCCTTGGACCTCTGAAGAAGACCGGAAGCTCGTAAACTATATTCAAACTCATGGACCAGGCAACTGGCGTACCCTTCCAAAAAAAGCTGGGCTTGAACGGTGTGGAAAGAGTTGTCGTCTCCGATGGACGAATTATCTCAGACCTGATATCAAAAGAGGAAGAATTTCATTTGAAGAAGAAGAGACGATAATCCAACTACACAGCATACTGGGAAACAAATGGTCGGAAATAGCTTCTCGGTTGCCGGGGAGGACAGACAATGAAATCAAGAACTACTGGAACACCCATATTAAGAAAAGACTTCTCAAAATGGGAATCGATCCAGTAACTCACGCTCCTAAGCTCGATCTGTCTTCAATCCTCAACGCAGCCTTCTGCAATCAACTCTCTCTCCTCAGTCTCTCAAACTTAATCGGAAACCAACCGACGGCCTTAAATTTAGACCTTCTGAGACTGTTTTCTATCCTCACAGCATCCAAACAAGAAAGCCCATCTTCTTCCTTTCCAGGACAAGTCCAAGAAAATCACCAGCTTTTGATCGATTCTGATCTATGCGAATGGAGAAATGGTTACCAGACTCCTGTTCCAGAAGCTTCTTCACCGGAGATGATAGGACAGATAATGCAACCCAATGTGGAATTTCTTTCTTCAACTTTATCGCCATCTACGAATTGCTATAACTTACCTAATTCCGACCAAAATCTAGTTTCTTCTGAGTTGTCTGAGTTTCTAGTAAACCAACCTAATTTTACGTGTGGCAGTAGTTTTTCCGACCATGTAATGTCTCAGTTGCCGGCAAACTTGAATCTCGGATCTCTGAGCCACCCCATTCATAATTCAACTCCGTTGAACTCATCGTCTACATATATCAACAGCACCAGCACCAGCACCGAAGATGAGAGAGAAAGCTACTGCAGCAGCTTGTTCCGCTTTGAAATTCCTGAGAGTTTGGACATGGATGACTTTCTGTAA 1017 43.56 MGRAPCCVKNGLKKGPWTSEEDRKLVNYIQTHGPGNWRTLPKKAGLERCGKSCRLRWTNYLRPDIKRGRISFEEEETIIQLHSILGNKWSEIASRLPGRTDNEIKNYWNTHIKKRLLKMGIDPVTHAPKLDLSSILNAAFCNQLSLLSLSNLIGNQPTALNLDLLRLFSILTASKQESPSSSFPGQVQENHQLLIDSDLCEWRNGYQTPVPEASSPEMIGQIMQPNVEFLSSTLSPSTNCYNLPNSDQNLVSSELSEFLVNQPNFTCGSSFSDHVMSQLPANLNLGSLSHPIHNSTPLNSSSTYINSTSTSTEDERESYCSSLFRFEIPESLDMDDFL 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 34683851 34685030 - Bma008007.1 Bma12g00764 92190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00764 338 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bma12g00764 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bma12g00764 338 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bma12g00764 338 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bma12g00764 338 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bma12g00764 338 Gene3D - 13 66 - -
Bma12g00764 338 CDD SANT 16 61 IPR001005 -
Bma12g00764 338 Gene3D - 71 116 - -
Bma12g00764 338 PANTHER TRANSCRIPTION FACTOR MYB41 1 333 - -
Bma12g00764 338 SMART sant 13 63 IPR001005 -
Bma12g00764 338 SMART sant 66 114 IPR001005 -
Bma12g00764 338 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bma12g00764 338 CDD SANT 71 112 IPR001005 -
Bma12g00764 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bma12g00764 338 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 333 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g01348 Bma12g00764 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00343 Bma-Chr7:4367192 Bma12g00764 Bma-Chr12:34683851 3.75E-87 dispersed
Bma12g00764 Bma-Chr12:34683851 Bma14g01455 Bma-Chr14:28010269 5.26E-73 dispersed
Bma14g00005 Bma-Chr14:51424 Bma12g00764 Bma-Chr12:34683851 2.37E-67 dispersed
Bma02g00922 Bma-Chr2:48664531 Bma12g00764 Bma-Chr12:34683851 3.74E-58 transposed
Bma11g00368 Bma-Chr11:3965121 Bma12g00764 Bma-Chr12:34683851 3.48E-99 wgd
Bma12g00764 Bma-Chr12:34683851 Bma02g01348 Bma-Chr2:55940405 1.44E-180 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58132 PF00249 Myb_DNA-binding 2.10E-14 CL0123 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00764 K09422 - qsu:112033181 356.295