Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00767 GCAGTCTCGTTCATGGAGTTCGATCTCGAAAACCCATTAAAATACTTTCATGATCTTCAATCCGATGCATTTGCCTCTCTATTTCTCGTTGAATCTGATCATATGCCGTCAGAATCTTACGTTCAGGGTCTTCGCTCTAATGATTCCGATATCTTTACCAGACGAGAGACCATTTCTTTGATTTCCCAGAGTTGCTGCAACTTCGATCCCCTACTGGCTTATCTCGCTATCACTTATCTCGATCGGTTCTTGTCCAACCAAGGAATCCTAGAACCAAAACCATGGGTTCTAAGGCTTCTCGCAGTCTCTTGTGTTTCATTAGCTGCGAAGATGAAGAAATCTGAATTCTCCCTCTCTGATTTTCAGAGCTATGGAGGTTTAATCTTCGACACACAAACGATAAAGAGAATGGAAATGCTGATATTGGGAGCTCTACAATGGCGAATGCGCTCCATCACTCCCTTCTCCTTCATTCCGTTTTTTATTTCTTTTTTCGAACATAAACATCCGCCATTGACGCAAGCTCTAAAAAGTCGAGCTTCTGAAATCATCTTTAAAGCTCAAACGGAGATCAAGCTCCTGGAGTTCAAGCCATCTGTGATTGCTGCATCTGCTTTACTTGCAGCTTCTCATGAACTCTTCCCAATACAATATCTATCCTTCAGAAAATCAATTTCTCGATGTTCACACATTAATAAAGACGACTTGTTTCGATGTTTTAGTGCAATGCAAGTTGTAGTGATTGACGGGTACGAGTCAGTTTTGGAAACGGGTCGGAGCTCCGGTACACCAGTAAATGTTTTAGACATCCATTTTACTACCAGCTCGGAAAGTGGAAGTGTGAGTGATACAGGTACAGCGAGGGTCAGTTCAAGAGTAGAGAGAGATGCGTAG 894 42.39 AVSFMEFDLENPLKYFHDLQSDAFASLFLVESDHMPSESYVQGLRSNDSDIFTRRETISLISQSCCNFDPLLAYLAITYLDRFLSNQGILEPKPWVLRLLAVSCVSLAAKMKKSEFSLSDFQSYGGLIFDTQTIKRMEMLILGALQWRMRSITPFSFIPFFISFFEHKHPPLTQALKSRASEIIFKAQTEIKLLEFKPSVIAASALLAASHELFPIQYLSFRKSISRCSHINKDDLFRCFSAMQVVVIDGYESVLETGRSSGTPVNVLDIHFTTSSESGSVSDTGTARVSSRVERDA 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 34808349 34809713 + Bma008011.1 Bma12g00767 92193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00767 297 MobiDBLite consensus disorder prediction 275 297 - -
Bma12g00767 297 Pfam Cyclin, N-terminal domain 24 149 IPR006671 -
Bma12g00767 297 Pfam Cyclin, C-terminal domain 152 247 IPR004367 -
Bma12g00767 297 Gene3D - 26 241 - -
Bma12g00767 297 SMART Cyclin_C_2 152 266 IPR004367 -
Bma12g00767 297 Gene3D - 37 150 - -
Bma12g00767 297 SUPERFAMILY Cyclin-like 134 246 IPR036915 -
Bma12g00767 297 PANTHER CYCLIN-D6-1-RELATED 9 283 - -
Bma12g00767 297 SUPERFAMILY Cyclin-like 13 149 IPR036915 -
Bma12g00767 297 CDD CYCLIN 53 142 IPR013763 -
Bma12g00767 297 PANTHER CYCLINS 9 283 IPR039361 -
Bma12g00767 297 SMART cyclin_7 59 143 IPR013763 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00713 Bma12g00767 CCT
Bma02g01346 Bma12g00767 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00601 Bma-Chr8:37983916 Bma12g00767 Bma-Chr12:34808349 9.80E-77 dispersed
Bma12g00767 Bma-Chr12:34808349 Bma01g02590 Bma-Chr1:83529174 4.07E-42 dispersed
Bma11g00364 Bma-Chr11:3907335 Bma12g00767 Bma-Chr12:34808349 4.15E-59 wgd
Bma12g00767 Bma-Chr12:34808349 Bma02g01346 Bma-Chr2:55928442 1.75E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00767 K18812 - qsu:111984715 380.178