Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00784 ATGCCTGGAAAGACAAAGCTGTCGCCATTGGGGCCTCATAGTCGAGGAAATAGTGCTTCAAGTGAAAGCAAAGATGACGATGATTCCGCATCTCAAAGGGCCAAGTTGAAGCCATTTTTCTGGGATAAGGTTCTTGCTAATCCTGATCAATCCATGGTGTGGCACGATATTAGTGCCGGTTCATTCCAGTTCAATGAAGAGATGATCGAGTCTTTATTTGGTTATGCCAACGTGAATAAGAACAAAACAAACCGCAGGAAAGAGTCATCCTCCCTCGACCCTTCAATCCAATATATTCAGATCATCGATGGTAAAAAGGCGCAAAACTTGTCAATTCTTCTGCGAGCATTAAATATTTCTACAGAAGAAGTTGTTGACGCCCTGAAAGAAGGAAACGAACTTCCAGTCGAGCTGCTCCAAACATTGTTGAAGATGGCACCGACGACAGAAGAGGAATTGAAGTTAAGGTTATTTAGTGGGGATCTTTCTCACCTTGGCTCTGCAGAGAGATTCCTCAAAGTATTAGTAGACATCCCATTTTCGTTCAAAAGAATAGACTCGCTTCTCTTCATGTGCTCTCTCCAGGAAGACCTCTCTGGCATTAAAGAGTCCTTTGCAACTCTCGAGGTCGCTTGCAACAAACTAAGACACAGCAGGCTATTCCTAAAGCTCTTAGAAGCAGTTCTTAAAACCGGTAATCGGATGAACGATGGTACTTTCCGGGGAAGTGCGCAGGCGTTTAAACTCGACACGCTCTTGAAACTGGCCGATGTTAAAGGAACAGACGGAAAGACTACACTCTTGCACTTTGTCGTTCAGGAGATTATACGATCCGAAGGCATTCGGGCTGCAAGAACAGCAAAAGAAAGCCGAAGCATGTCAAGTGTAAAATCAGGGGAGTACTCTGAAGATATTTTGGAGGAATCCGCAGACCATTATCGCCAACTTGGTCTGCAGGTCGTCTCCGGATTAAGCACTGAACTTGTAGATGTCAAAAAGGCGTCGATAATAGATGCCGACGGGCTTACAGCTACGGTCTCAAGACTCGGAAATGCAATCATTAAAACGAGAAATTTCTTAGCTAACGAGATGACGAACCTCGACGAAGAAAGCAAATTCTATCCGACACTGTCGAGTTTTGTGGAGCAGAAAGAACCAGAAATCGTGGAGATCTTAGAAGAAGAGAAGAAAATCAGGACTCTGATAAAGAGCACAGGGGACTATTTCCATGGAAATTCTGGAAAAGATGAAGGTTTGAGACTATTTGTGATTGTACGTGATTTTCTGATAATGCTAGATAAGGCATGTAAAGATGTTAGAGATGGTGCAGCCAAGAAGACAAGTATTTCCAAGAAAGCAAATCAAGTAACATCTCCTTCTCGACAGCAACGTTTAGATATCCACCAAAGACTATTTCCGGTAATTGCAGGACGGAGAAACGATGCATCGAGCTCAGACGATGAGGGCATATCTCCGTAG 1479 43.68 MPGKTKLSPLGPHSRGNSASSESKDDDDSASQRAKLKPFFWDKVLANPDQSMVWHDISAGSFQFNEEMIESLFGYANVNKNKTNRRKESSSLDPSIQYIQIIDGKKAQNLSILLRALNISTEEVVDALKEGNELPVELLQTLLKMAPTTEEELKLRLFSGDLSHLGSAERFLKVLVDIPFSFKRIDSLLFMCSLQEDLSGIKESFATLEVACNKLRHSRLFLKLLEAVLKTGNRMNDGTFRGSAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRSEGIRAARTAKESRSMSSVKSGEYSEDILEESADHYRQLGLQVVSGLSTELVDVKKASIIDADGLTATVSRLGNAIIKTRNFLANEMTNLDEESKFYPTLSSFVEQKEPEIVEILEEEKKIRTLIKSTGDYFHGNSGKDEGLRLFVIVRDFLIMLDKACKDVRDGAAKKTSISKKANQVTSPSRQQRLDIHQRLFPVIAGRRNDASSSDDEGISP 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 35983666 35985427 - Bma008045.1 Bma12g00784 92210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00784 492 SUPERFAMILY Formin homology 2 domain (FH2 domain) 97 452 - -
Bma12g00784 492 PANTHER FORMIN-LIKE PROTEIN 3 4 489 - -
Bma12g00784 492 MobiDBLite consensus disorder prediction 1 31 - -
Bma12g00784 492 PANTHER FORMIN-RELATED 4 489 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bma12g00784 492 ProSiteProfiles Formin homology-2 (FH2) domain profile. 26 458 IPR015425 -
Bma12g00784 492 SMART it6_source 26 447 IPR015425 -
Bma12g00784 492 Pfam Formin Homology 2 Domain 31 432 IPR015425 -
Bma12g00784 492 Gene3D Formin, FH2 domain 33 470 IPR042201 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g01338 Bma12g00784 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00347 Bma-Chr6:7727513 Bma12g00784 Bma-Chr12:35983666 3.84E-113 dispersed
Bma07g01317 Bma-Chr7:48711935 Bma12g00784 Bma-Chr12:35983666 2.39E-180 dispersed
Bma12g00784 Bma-Chr12:35983666 Bma14g00359 Bma-Chr14:4370430 0 dispersed
Bma12g00784 Bma-Chr12:35983666 Bma02g01338 Bma-Chr2:55864214 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00784 - - qlo:115955285 669.077