Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00789 ATGGAATGGAATTGTCAATTGGCTTTTATAGTTGTTCTTTTAGGACTTTCAGCTTTAACTCATGCTGAATTGCAGCTTGGTTTTTATGCTAAGAGCTGCCCAAATGCTGAGAAAATTGTGCAGGATTTTGTTCACCAGCACATCCACAATGCTCCATCACTAGCTGCAACTTTCATCAGAATGCATTTCCATGATTGCTTTGTCAGGGGTTGTGATGCTTCTGTGCTCATAAATTCCACGTCGAGCAATCAAGCTGAGAAAGATGCTCCTCCGAATCTGAGTCTCAGAGGCTTCGGCTTCATAGATGCAGTTAAAATCTTACTAGAATCTGAATGTCCAGGAGTAGTCTCTTGTGCTGATGTTCTAGCTTTGGTCTCAAGAGACTCTATTGTAGCCACAGGAGGTCCTTTCTGGCCAGTTCCGACCGGCAGAAGGGACGGAGTCATCTCGAGGTCATCAGAAGCTTTGGCAAATATCCCTTCTCCCTTTAGCAACTTTACGACCCTCCAAACGCAATTTGCAAACAAGGGTCTTGATCTCAAAGACTTGCTGTCTCTTATTTCAGGGGCTCACACCATTGGAATATCTCACTGCCCATCCTTCTCAAATCGCCTGTATAACTTCACCGGAATCGGCGATCAAGACCCGGCTTTAGATAGTGAATATGCTGCCAATCTAAAGGCCAGGAAGTGTAGAAGCCAAAGCGATAATACCACATTAGTTGAGATGGACCCTGGAAGTCGCAGGACATTTGATCTTAGTTACTACTCACTTCTTTTGAAGAGAAGAGGCCTCTTTCAGTCTGATGCTGCTCTGACCACTAATCCATACACGAAGTCATTCGTTACTCAACTCCTCCAAGGTTCAGTCCATGATTTCCACTCGCAGTTCGCCAAATCCATGCAAAAAATGGGTCGGATTACTGACAAATCTGGTTCCGGCGGGGAAATCAGGAAGCGCTGCGCCGTCGTGAATAGTTAG 981 45.26 MEWNCQLAFIVVLLGLSALTHAELQLGFYAKSCPNAEKIVQDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDASVLINSTSSNQAEKDAPPNLSLRGFGFIDAVKILLESECPGVVSCADVLALVSRDSIVATGGPFWPVPTGRRDGVISRSSEALANIPSPFSNFTTLQTQFANKGLDLKDLLSLISGAHTIGISHCPSFSNRLYNFTGIGDQDPALDSEYAANLKARKCRSQSDNTTLVEMDPGSRRTFDLSYYSLLLKRRGLFQSDAALTTNPYTKSFVTQLLQGSVHDFHSQFAKSMQKMGRITDKSGSGGEIRKRCAVVNS 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 36482569 36483785 - Bma008054.1 Bma12g00789 92215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00789 326 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 SUPERFAMILY Heme-dependent peroxidases 24 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 CDD secretory_peroxidase 23 324 IPR033905 GO:0004601|GO:0042744
Bma12g00789 326 ProSiteProfiles Plant heme peroxidase family profile. 23 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 Pfam Peroxidase 40 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Bma12g00789 326 PANTHER PEROXIDASE 25-RELATED 9 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00789 326 Gene3D Peroxidase, domain 2 160 304 - -
Bma12g00789 326 Gene3D - 27 325 - -
Bma12g00789 326 PANTHER PEROXIDASE 9 325 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00580 Bma-Chr8:35462504 Bma12g00789 Bma-Chr12:36482569 9.99E-176 dispersed
Bma09g00177 Bma-Chr9:6543039 Bma12g00789 Bma-Chr12:36482569 3.34E-94 dispersed
Bma09g00180 Bma-Chr9:6651561 Bma12g00789 Bma-Chr12:36482569 6.35E-94 dispersed
Bma12g00789 Bma-Chr12:36482569 Bma12g00391 Bma-Chr12:8225846 6.09E-86 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00789 K00430 - jre:109020639 501.13