Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00790 ATGCTAGCAATGGCATGCAATTCCTTTTCTGGCCCTGTAGTTCCAACTACTCCTCTGGTCATCTTTCTTGAATCTGTTCAAGAGACGGCGTTCACTACCTTCGGAAAATCTGACTTCGACCCTAAATTTTATGTCGATTTGTCCCTCAAGTTCGATTTGGAGACGACGAAGAGCGCTTTCAAAAGCCTCCCAAAGTCTTCAAACGGGTCTGTTCCGGTTGAGAATATGAAGGGGTTTATAGAGGAGTATTTTCACGGCGCAGGGGAGGATTTGATTTACGCTGAGCCTGTGGATTTTGTTGCAGAGCCCGAACGGTTCTTGCCAGGAGTCGAGAACCTGGAGGTAAGACGTTGGGCATTGGAATTGCATTCTCTTTGGAAGAATTTGAGTCGCAAAATTTCTGATAGGGTCGTGAGGCAGCCTGAGCTTCATACTTTGCTTCCATTGCCTGAGCTAACTGTAATTCCAGGATCACGTTTCCGGGAGGTTTACTATTGGGATTCTTACTGGATTATTAGAGGCTTGCTGGTAAGTAGAATGCATGAGACAGCAAAGGCAATTGCAATTAACTTAATATCATTAGTAGAAGAATATGGTTATGTACTAAACGGAGCTAGAGCCTATTACACTAATAGAAGCCAGCCTCCACTCTTAAGTGCAATGGTTTATGAGATATTTAGTAGAACAAGTGATGCAGATTTTGTCCGCAAAGTGCTACCATCTCTGCTTAGAGAACATAAATTTTGGACTTCAGGAGTACACAAGGTGATAATTCAGGATGCACATGCTTGTAACCATACGATGAGTCGTTATTATGCAATGTGGGACAAACCTCGACCCGAATCCTCTACCATAGACAAGGACGTTGCTTCCAAGCTCCCATATGAATCAGAAAAACAATGCCTTTACAGAGAGCTAGCCTCAACAGCTGAATCCGGCTGGGACTTTAGTACTAGATGGATGAAGGATCCCTCTGATTTGACAACATTAGCCACAACATCAATTTTACCTGTTGATCTTAATATATTCCTCCTCAAAATGGAACATGATATTGCCTTTTTGGCAAAAGCAATAGGAGATGTCAGCACTGCAAATCAACTTTATACGGTTTATCAGTTGCGAAAGGCATCAATTAATTCAGTTTTCTGGAGCGAAAAGAAAGGGCAATGGCTTGATTACTGGGTAGAAAATTCCTCTGAAATGGGAGCTCATACATGGGATATACGAAACCAGAATGAGAAGATATTTGCTTCAAACTTTGTACCTCTGTGGATCGAATCATTTTATTCAGATACATCATTGCTTGAGAAAGTTATGGAAAGCTTGCGGAGTTCAGGCTTGATTGGTGAAGCTGGGATTGCAACTTCATTGACTAATTCGGGACAACAATGGGACTTTCCCAATGGTTGGGCACCTCTTCAACACATGATAGTTGAAGGATTGGGAAGATCTGGATCAAAAGAAGCAAGGGAAATGGCAAAAGACATTGTCGTGAGATGGATTCGAACCAACTACGTTGCTTACAAAAATACAGGGGCAATGCATGAGAAATACGACGTCCGAGAGTGCGGAAAATTTGGTGGAGGAGGTGAATATGTTCCTCAGACTGGTTTTGGATGGACAAATGGAGTTGTGTTGGCATTTTTAGAGGAATTTGGATGGCCAAAAGACCTACACATAGATTGCTGCTGA 1692 42.38 MLAMACNSFSGPVVPTTPLVIFLESVQETAFTTFGKSDFDPKFYVDLSLKFDLETTKSAFKSLPKSSNGSVPVENMKGFIEEYFHGAGEDLIYAEPVDFVAEPERFLPGVENLEVRRWALELHSLWKNLSRKISDRVVRQPELHTLLPLPELTVIPGSRFREVYYWDSYWIIRGLLVSRMHETAKAIAINLISLVEEYGYVLNGARAYYTNRSQPPLLSAMVYEIFSRTSDADFVRKVLPSLLREHKFWTSGVHKVIIQDAHACNHTMSRYYAMWDKPRPESSTIDKDVASKLPYESEKQCLYRELASTAESGWDFSTRWMKDPSDLTTLATTSILPVDLNIFLLKMEHDIAFLAKAIGDVSTANQLYTVYQLRKASINSVFWSEKKGQWLDYWVENSSEMGAHTWDIRNQNEKIFASNFVPLWIESFYSDTSLLEKVMESLRSSGLIGEAGIATSLTNSGQQWDFPNGWAPLQHMIVEGLGRSGSKEAREMAKDIVVRWIRTNYVAYKNTGAMHEKYDVRECGKFGGGGEYVPQTGFGWTNGVVLAFLEEFGWPKDLHIDCC 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 36536074 36540024 - Bma008057.1 Bma12g00790 92216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00790 563 Pfam Trehalase 38 553 IPR001661 GO:0004555|GO:0005991
Bma12g00790 563 ProSitePatterns Trehalase signature 2. 463 472 IPR018232 GO:0004555|GO:0005991
Bma12g00790 563 PANTHER TREHALASE 10 563 IPR001661 GO:0004555|GO:0005991
Bma12g00790 563 SUPERFAMILY Six-hairpin glycosidases 35 555 IPR008928 GO:0005975
Bma12g00790 563 PRINTS Glycosyl hydrolase family 37 signature 268 285 IPR001661 GO:0004555|GO:0005991
Bma12g00790 563 PRINTS Glycosyl hydrolase family 37 signature 303 320 IPR001661 GO:0004555|GO:0005991
Bma12g00790 563 PRINTS Glycosyl hydrolase family 37 signature 378 394 IPR001661 GO:0004555|GO:0005991
Bma12g00790 563 PRINTS Glycosyl hydrolase family 37 signature 198 216 IPR001661 GO:0004555|GO:0005991
Bma12g00790 563 PRINTS Glycosyl hydrolase family 37 signature 456 472 IPR001661 GO:0004555|GO:0005991
Bma12g00790 563 PRINTS Glycosyl hydrolase family 37 signature 335 352 IPR001661 GO:0004555|GO:0005991
Bma12g00790 563 PRINTS Glycosyl hydrolase family 37 signature 536 549 IPR001661 GO:0004555|GO:0005991
Bma12g00790 563 PANTHER TREHALASE 10 563 - -
Bma12g00790 563 Gene3D - 23 559 IPR012341 GO:0005975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00790 K01194 - qsu:111986510 837.795