Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma12g00800 | ATGGATGCCGCCGTCTCGGACATAAATGCCGACCCTACCGTTCTCAACGGGACAAAGCTGAATTTGATTATGGAGGACGTAGACTGCAATGTCTTCCTGGGTTCCATTAGAGCGTTTCAGGTGCTTGAGAAAGAGGTTGTGGCCATTGTAGGGCCTCAGTCTTCTTCCATAGCTCATATGATTTCTCAGATCGCCAATGGTTTGCAAGTGCCTCTTGTCTCATATGCTGCCACTGATCCAACTTTGTCAGCCCTCCAATTTCCCTACTTTGTCCGAACTACACCAAGTGATTCCTATCAAATGGCTGCCATGGCTGACTTGATTGACTTTTATGAGTGGAAAGAGGTCATCGCCATCTTTGAGGACAACAAATATGGAAGAAACGGAATATCTGCTTTAGATAATGAGCTCCAGAAGAAGATGGCTAAAGTTTCGCTTAAATTGCCCATGCATCCCCTATTTAATCACAGCGAGATCGCTCATTTGCTCAATAATTCAAAATTACTTGGTCCTCGTGTGTATGTTGTTCATGTTAGTCCTGATCCCAGATTAAGAATATTTAGAATAGCTGACCAGCTTCAAATGATGACCAACAACTATGTATGGCTTGCTACAGATTGGCTTTCAACGACATTAGATTCACTCTCTCCTACTGATCTATCTTCTCTGGATAGCCTACAAGGCATTGTCGGACTCCGTCAACATTTTCCAGCATCGAATCAGAAGACAGCTTTTTTGTCTCGATTGAGCAAGCAAGAAGGTTCCAGAAGTTCTGCGCATTATGCTTATGCACTTATTGCTTATGATACAATATGGTTAGTTGCTCGCTCGATTGATAAGTTTCTAAAAACGAATGGGAACTTGACATTTTCCTTGACAGATAAGTTACAAAATGTGAATGCATCTAGAATTCACCTGGGCGAACTCAAAGTCTTTAGCGGTGGAGATCGTCTTCTGAGCATACTATTGCAAACAAATTTCACTGGTTTAACTGGTCAAGCTCAATTTAGTTCAGATCGTAATCGTGTTGGTGGCAGTTATGGTGTGATAAACATTAACCGAGGAACTGCTTGGGAAGTTGGTTTTTGGTCTAATGCCTCAGGCTTTACAGTTTTACCACCAGAAACTCTTAATGAGAAACAAATTAGCTATTCTCGTCTAAATCAGGAGCTTGGCAATGTGACTTGGCCTGGTGGAAAGACAAATAGACCACAGGGCTGGGTTATTGCAGATGATGCGAAGCCTCTGAAAATTGGAGTGCCGAAAAGAGCTAGTTTCGTTGAATTTGTCACAGAATCGAACAACACCCACAAGATTCAAGGATACTGCATTGACGTGTTTATAGAGGCACGGAAGTTGGTCCCTTACGACGTTCCATATATATTCGTGCCTTTTGGTGATGGCCATGCCAATCCCAGTTACTCCGACCTTGTGCAGAATGTTGCAAATAATGTGTTCGATGCTGCCGTTGGAGATATAGCAATCGTGACCAACCGAACAAAGATTGTGGATTTTTCGCAGCCTTTTATTGCAACTGGTCTTGTTATTGTGGCCCCCATTGAAAATTCAAAATCTAGCGCTTGGGTTTTCCTCAAACCTTTTACGGTGGAGATGTGGTGCGTCACAGTAGCATCATTTGTCCTGGTTGGAATCGTTATATGGATTCTTGAGCATCGAGTTAATGATGATTTCCGGGGCCCTCCAAAAACGCAGATTGTGACAGTTTTATTGTTCAGCTTCTCAACTCTTTTTAAGACAAATCAGGAAGTTATGGTTAGCCCACTGGCAAGGATGATTATGGTGATCTGGCTTTTCTTATTGATGGTTATCACTTCAAGCTACACGGCAAGTTTGACTTCAATCCTTACAGTTCAGCAGCTTTCGTCTCCTATCACCGGAATCGATAGCTTAATTGCAAGTAATTGGCCTATTGGATACCAGGTAGGGTCCTTTACCTACAGCTATCTGACCGAGAACTTATACATACATGGATCAAGACTTGTTTCTCTAGGCTCTCCGGAAGAGTATGAAAAAGCTCTTCGACTAGGGCCTCGTAATGGAGGAGTGGCTGCCATTATAGACGAGCTTCCATATGTGGAGTTGTTTTTGTCGAAAACTCATGATTTTGGGATTATTGGGCAGACATTTACCAAAAGCGGCTGGGGTTTTGCTTTCAAGAGAGACTCTCCTCTTGCAATTGACATTTCCACTGCAATTTTGAAACTTTCTGAGAACGGAAAGCTTCAAAAAATACGCGAGAAGTGGTTCTGTCAAATGGGTTGCCCCGGCGATAGAATACATACATCCTCACCAAACCAGCTTCCCTTAATGAGCTTCTGGGGTTTATATCTCTTCTGTGGTTTTCTTTGTCTAGCTGCGCTCCTCATATTTCTACTGAGAATGAACGGACGTATCTTCATCAGTAGGGCATTGTTTGTGTTAAGTTTGCACGTATGGCTGCTAATTGGAGTAATGGGTGGGACAGGAAATGGCAGTGCTTTTCCGAGCGTAGTGAATATTGGTGCTTTGTTTACTGTTGACTCGGTGATTGGAAGGTCTGCAAAGCCCGGAATTTTAGCTGCGTTGGACGATGTCAATGCCGATACAACTGTTCTTCCTCACACTAAGTTGAATGTGATTTTACACGATACAAATTGCAGTGGCTTTATAGGAACTGTGGAAGCTTTGCAGCTAATGGAAGATGAAGTAGTTGCTGCAATTGGCCCACAATCCTCTGGAATATCTCATGTCATTTCCCATGTTGTTGACGAACTTCAAGTGCCCCTTCTATCTTTTGCATCAACAGATCCGACCCTTTCAGCTCTACAATTTCCGTATTTTGTTCGGACTACACAGAGTGATTATTTCCAGATGAAGGCAATTGCTGATCTGATAGAGTATTATGGATGGAGAGAGGTCATTGCTATATTTGTGGATGATGATTACGGAAGAAGCGGAATATCAGTTTTAGGCGATGCACTCGCTAAAAAGCGATCAAAAATTTCTTTCAAGGCTGCTATCGCTCCTGGGGCCTCTCGAATTGATGTCAACGACTTGTTGGTTGGGGTAAATCTCATGGAATCTCGTGTATATGTCGTGCATGTCAATCCCGACTCTGGTTTGTCGATATTTTCTGCTGCGAATAGTCTTGGAATGATGAGTGGTGGCTATGTGTGGATTGCCACAGATTGGCTTCCTTCTCTTCTTGATTCGTTAGAAACGGCTAACCCAGATGTTATGAATCTCATACAAGGAGTTGTTGCTCTTCGTCACCACATCCCTGACGATGATCTAAGAACGAAAACTGCTTCAAAATGGAAGAATCGAAATTACAATTCGACCCAAAATTTGAATACTTACGCGTTTTATGCATATGACTCCGTCTGGTTAGCAGCCCGTGCTCTTGACGCTTTCTTCAAAGAAGGTGGGAATATATCTTTCTCTGGTGACTCAAGTTTGGACGATACACGTGGCAGTGTGCTTCATCTATCATCGCTCCGAATTTTCGACGGGGGAAAACAGCTTCTACAGACAATTTTGAGAACAAACTTCACTGGTCTGAGCGGTCAGATTCAATTTGATCAAGATAAAAACTTAGTTGATCCAGCATACGATATTCTCAACATCGGTGGAACTGGTTTACGTAGAGTTGGTTTTTGGTCGAATCATTCGAGTTTATCAACCGTTCCTCCTGAGACTTTATATTCAACGCCACTCAACAGTTCTTCTAGTAGTTTAGGTCTTTACAGCATAATATGGCCGGGTGAAACGATAAAAACTCCTCGTGGATGGGTATTTCCGAACAACGGAAAGCCCCTTCGGATTGCAGTGCCGTATAGAGTGAGCTACAAAGAATTTGTGTCGAAAGACTCGAGTCCTCCTGGCGTTAAAGGGTTCTGTATTGACGTGTTTGAGGCTGCCGTAAACTTGCTGCCTTATCCAGTTCCACGCGAGTTTATATTATACGGAGACGGAAAGGAAAATCCTTCGTACAATAATATTGTTTATGATGTTTATCAAAATAAATTCGATGCTGCCGTTGGTGATGTTACGATCGTCACGAATCGGACGAAGCTCGTGGACTTCACTCAGCCTTTCATGACTTCAGGGCTCGTTGTCGTGGCCACGGTCAGACAGGCAAAGTCTAGTGCTTGGGCTTTCCTCCGCCCATTCACGATTCAAATGTGGCTTGTCACTGGTTCATTCTTCCTTTTTGTAGGAGCCGTTGTTTGGATACTTGAGCATCGTGTTAATCCGGAGTTTCGTGGGCCACCCAGACAACAACTCATTACAATGTTTTGGTTCAGTTTTTCGACAATGTTCTTTTCCCACAGAGAAAACACAATGAGCACTTCTGGCCGGTTTGTACTACTAATATGGCTATTTGTGGTGTTAATTATTAATTCAAGTTACACGGCTAGCTTGACGTCGATTCTTACGGTGCAACAGCTGACATCGAAGATTGGAGGGATGGATACCTTAATCTCGAGCACCGATCCAATAGGAATTCAAGTAGGATCATTTGCTTATAATTATCTGACTGAGGAATTGAATATAGCACAGTCTAGGATCATTCAGTTGAAAGGGCTGGAAGAATATACTACCGCTCTTCAGAAAGGGCCCGGAGGCGGTGGAGTAGCGGCCATTGTTGACGAGCTTCCGTACATCGAGAGGTTTTTGACAAGCACCAATTGTGCATTCAGGACTGTTGGACAAGAGTTCACAAAAAGTGGATGGGGATTTGCGTTTCAGAGGGACTCTCCTCTCGCCATTGATTTATCGACGGCAATTCTTCAACTGTCGGAGAATGGCGATCTTCAAAAGATTCACGATAAATGGCTCTCGACGACTCAATGCTCTATGCAGCTCAACCAAGTCGATGCGAATCAGTTATCTCTCGATAGCTTTTGGGGACTTTTTCTTATTTGTGGCATTGCATGCTTCCTCGCTCTTCTCGTGTTCTTCTTTCGTGTTATCTGCCAATACCTCAAATTCGTACCCCATCTCGAACCCAAAGCTGATATCGAGGAGAACGAAGCTGCTCGAACAATAAAGTCGACTGGTTCAAATAGCTTCAAACGATTGATCAATTTTGTAGATAAGAAAGAAGTAGAGATTAAGCATATGCTAAAGCAAAAGACAATAGACAAAAAACAAGCTAGCCAGAGCTCTATTGCGCATTCGATTTCACTGTCTTGA | 5199 | 43.07 | MDAAVSDINADPTVLNGTKLNLIMEDVDCNVFLGSIRAFQVLEKEVVAIVGPQSSSIAHMISQIANGLQVPLVSYAATDPTLSALQFPYFVRTTPSDSYQMAAMADLIDFYEWKEVIAIFEDNKYGRNGISALDNELQKKMAKVSLKLPMHPLFNHSEIAHLLNNSKLLGPRVYVVHVSPDPRLRIFRIADQLQMMTNNYVWLATDWLSTTLDSLSPTDLSSLDSLQGIVGLRQHFPASNQKTAFLSRLSKQEGSRSSAHYAYALIAYDTIWLVARSIDKFLKTNGNLTFSLTDKLQNVNASRIHLGELKVFSGGDRLLSILLQTNFTGLTGQAQFSSDRNRVGGSYGVININRGTAWEVGFWSNASGFTVLPPETLNEKQISYSRLNQELGNVTWPGGKTNRPQGWVIADDAKPLKIGVPKRASFVEFVTESNNTHKIQGYCIDVFIEARKLVPYDVPYIFVPFGDGHANPSYSDLVQNVANNVFDAAVGDIAIVTNRTKIVDFSQPFIATGLVIVAPIENSKSSAWVFLKPFTVEMWCVTVASFVLVGIVIWILEHRVNDDFRGPPKTQIVTVLLFSFSTLFKTNQEVMVSPLARMIMVIWLFLLMVITSSYTASLTSILTVQQLSSPITGIDSLIASNWPIGYQVGSFTYSYLTENLYIHGSRLVSLGSPEEYEKALRLGPRNGGVAAIIDELPYVELFLSKTHDFGIIGQTFTKSGWGFAFKRDSPLAIDISTAILKLSENGKLQKIREKWFCQMGCPGDRIHTSSPNQLPLMSFWGLYLFCGFLCLAALLIFLLRMNGRIFISRALFVLSLHVWLLIGVMGGTGNGSAFPSVVNIGALFTVDSVIGRSAKPGILAALDDVNADTTVLPHTKLNVILHDTNCSGFIGTVEALQLMEDEVVAAIGPQSSGISHVISHVVDELQVPLLSFASTDPTLSALQFPYFVRTTQSDYFQMKAIADLIEYYGWREVIAIFVDDDYGRSGISVLGDALAKKRSKISFKAAIAPGASRIDVNDLLVGVNLMESRVYVVHVNPDSGLSIFSAANSLGMMSGGYVWIATDWLPSLLDSLETANPDVMNLIQGVVALRHHIPDDDLRTKTASKWKNRNYNSTQNLNTYAFYAYDSVWLAARALDAFFKEGGNISFSGDSSLDDTRGSVLHLSSLRIFDGGKQLLQTILRTNFTGLSGQIQFDQDKNLVDPAYDILNIGGTGLRRVGFWSNHSSLSTVPPETLYSTPLNSSSSSLGLYSIIWPGETIKTPRGWVFPNNGKPLRIAVPYRVSYKEFVSKDSSPPGVKGFCIDVFEAAVNLLPYPVPREFILYGDGKENPSYNNIVYDVYQNKFDAAVGDVTIVTNRTKLVDFTQPFMTSGLVVVATVRQAKSSAWAFLRPFTIQMWLVTGSFFLFVGAVVWILEHRVNPEFRGPPRQQLITMFWFSFSTMFFSHRENTMSTSGRFVLLIWLFVVLIINSSYTASLTSILTVQQLTSKIGGMDTLISSTDPIGIQVGSFAYNYLTEELNIAQSRIIQLKGLEEYTTALQKGPGGGGVAAIVDELPYIERFLTSTNCAFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHDKWLSTTQCSMQLNQVDANQLSLDSFWGLFLICGIACFLALLVFFFRVICQYLKFVPHLEPKADIEENEAARTIKSTGSNSFKRLINFVDKKEVEIKHMLKQKTIDKKQASQSSIAHSISLS | 1732 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 37363190 | 37379527 | - | Bma008080.1 | Bma12g00800 | 92226 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma12g00800 | 1732 | Gene3D | - | 704 | 763 | - | - | |
Bma12g00800 | 1732 | Gene3D | - | 1561 | 1621 | - | - | |
Bma12g00800 | 1732 | PANTHER | GLUTAMATE RECEPTOR 3.7 | 1 | 801 | - | - | |
Bma12g00800 | 1732 | PANTHER | GLUTAMATE RECEPTOR 3.7 | 831 | 1719 | - | - | |
Bma12g00800 | 1732 | SUPERFAMILY | Periplasmic binding protein-like I | 1 | 407 | IPR028082 | - | |
Bma12g00800 | 1732 | Gene3D | - | 860 | 1201 | - | - | |
Bma12g00800 | 1732 | Gene3D | - | 1273 | 1383 | - | - | |
Bma12g00800 | 1732 | Pfam | Receptor family ligand binding region | 856 | 1210 | IPR001828 | - | |
Bma12g00800 | 1732 | Pfam | Receptor family ligand binding region | 1 | 354 | IPR001828 | - | |
Bma12g00800 | 1732 | Gene3D | - | 96 | 369 | - | - | |
Bma12g00800 | 1732 | Pfam | Bacterial extracellular solute-binding proteins, family 3 | 428 | 756 | IPR001638 | - | |
Bma12g00800 | 1732 | Gene3D | - | 408 | 526 | - | - | |
Bma12g00800 | 1732 | Gene3D | - | 953 | 1225 | - | - | |
Bma12g00800 | 1732 | SUPERFAMILY | Periplasmic binding protein-like II | 394 | 757 | - | - | |
Bma12g00800 | 1732 | Pfam | Ligand-gated ion channel | 757 | 787 | IPR001320 | GO:0015276|GO:0016020 | |
Bma12g00800 | 1732 | SMART | GluR_14 | 417 | 758 | IPR001320 | GO:0015276|GO:0016020 | |
Bma12g00800 | 1732 | SMART | GluR_14 | 1274 | 1616 | IPR001320 | GO:0015276|GO:0016020 | |
Bma12g00800 | 1732 | Pfam | Ligand-gated ion channel | 1616 | 1647 | IPR001320 | GO:0015276|GO:0016020 | |
Bma12g00800 | 1732 | PANTHER | IONOTROPIC GLUTAMATE RECEPTOR | 1 | 801 | - | - | |
Bma12g00800 | 1732 | PANTHER | IONOTROPIC GLUTAMATE RECEPTOR | 831 | 1719 | - | - | |
Bma12g00800 | 1732 | Gene3D | - | 1384 | 1519 | - | - | |
Bma12g00800 | 1732 | Gene3D | - | 527 | 657 | - | - | |
Bma12g00800 | 1732 | CDD | GluR_Plant | 1271 | 1614 | - | - | |
Bma12g00800 | 1732 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 851 | 867 | - | - | |
Bma12g00800 | 1732 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 911 | 939 | - | - | |
Bma12g00800 | 1732 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 1124 | 1136 | - | - | |
Bma12g00800 | 1732 | SUPERFAMILY | Periplasmic binding protein-like I | 832 | 1265 | IPR028082 | - | |
Bma12g00800 | 1732 | CDD | PBP1_GABAb_receptor_plant | 839 | 1230 | IPR044440 | - | |
Bma12g00800 | 1732 | Pfam | Bacterial extracellular solute-binding proteins, family 3 | 1286 | 1615 | IPR001638 | - | |
Bma12g00800 | 1732 | CDD | GluR_Plant | 414 | 756 | - | - | |
Bma12g00800 | 1732 | SUPERFAMILY | Periplasmic binding protein-like II | 1247 | 1614 | - | - | |
Bma12g00800 | 1732 | Gene3D | - | 2 | 344 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g02415 | Bma-Chr1:81763424 | Bma12g00800 | Bma-Chr12:37363190 | 0 | dispersed | |
Bma08g00714 | Bma-Chr8:42929176 | Bma12g00800 | Bma-Chr12:37363190 | 0 | dispersed | |
Bma09g00235 | Bma-Chr9:10098898 | Bma12g00800 | Bma-Chr12:37363190 | 0 | dispersed | |
Bma10g00751 | Bma-Chr10:11972624 | Bma12g00800 | Bma-Chr12:37363190 | 7.17E-126 | dispersed | |
Bma12g00800 | Bma-Chr12:37363190 | Bma14g00262 | Bma-Chr14:3083093 | 2.39E-37 | dispersed | |
Bma12g00800 | Bma-Chr12:37363190 | Bma02g00328 | Bma-Chr2:4485146 | 8.71E-66 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma12g00800 | K05387 | - | qsu:112026600 | 1347.41 |