Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00825 ATGCCAAATATTCTCCCAAATATTTCCCCTCCACCATCTGCTTTCCTCGGACCAAAATGTGCTCTATGGGAGTGTTTCAGACCTGCCCAAGTATCGGAATGGTGCCATGATTACTGTAGTACCTGTCATTCAGTTCTAGCAAAAAATGAAGGTTTTGCTGGTATGAACCCCATCGTGCGACCTGGAGGCATTGGTTTGAAGGATGGTCCTTTATTAGCTGCACTCAATGCAAAGTCACAGGGAAAGGAAGTTGGAATCCCTACATGCGATGGAGCTGCCACTTTGAAATCTCCCTGGAATGCTTCAAATCTATTTGATGTTTCCTTTCTTCATGGCGAGACTTTGAGAGAATGGCTCTTTTTTGACAAACCCAGAAGAGCATTTGAGACTGGAAATCGAAAACAAAGGTCAATACCGGATTATCCAGGACGTGGTTGGCATGAATCGAGAAAGCAGGCGATGAAAGAATATGATGGGCAAAAGAGGTCTTATTACATGGATCCTCAGCCATCGAGTTCTTACGAATGGCATTTGTACGAATACGAGATCAACGACTATAATTCATGTGCATTGTATAGGTTGGAATTCAAGCATTCTAATGCTAAGAAGAGCCAGAAGGGGAAAGTGCCTACTGACTCTCTTGCCGATTTGCAGAAGAAGATGGGACGGCTCACGGCAGAGGGTCCTCCATAG 693 44.59 MPNILPNISPPPSAFLGPKCALWECFRPAQVSEWCHDYCSTCHSVLAKNEGFAGMNPIVRPGGIGLKDGPLLAALNAKSQGKEVGIPTCDGAATLKSPWNASNLFDVSFLHGETLREWLFFDKPRRAFETGNRKQRSIPDYPGRGWHESRKQAMKEYDGQKRSYYMDPQPSSSYEWHLYEYEINDYNSCALYRLEFKHSNAKKSQKGKVPTDSLADLQKKMGRLTAEGPP 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 38216961 38217848 - Bma008124.1 Bma12g00825 92251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00825 230 MobiDBLite consensus disorder prediction 131 150 - -
Bma12g00825 230 PANTHER TRANSCRIPTION FACTOR VOZ1 2 229 IPR039277 GO:0006355|GO:0048578
Bma12g00825 230 MobiDBLite consensus disorder prediction 201 230 - -
Bma12g00825 230 PANTHER TRANSCRIPTION FACTOR VOZ2 2 229 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00428 Bma-Chr11:4696097 Bma12g00825 Bma-Chr12:38216961 3.68E-119 dispersed
Bma12g00825 Bma-Chr12:38216961 Bma07g00407 Bma-Chr7:4967455 2.06E-119 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58139 None None None None Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00825 - - csv:101211467 382.489