Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00909 TCAATGTTAGTCGAAGATTATCAGAGCTCTGGACCCTTAGTTCAGGACCCTCCAACGGTCGCTCAGAGCCGTGTACATCGCCAGAAGTATGACGTGTATACTGAGGTTCTCCGCCGTCTTCAGGAATCCAATCGCGAGGAAGTCGCTCAGCCTGGATTTGAAGAGGAGCTGTTGGCTCACTTTAATCGCCTCCCTGCACGGTATGCATTGGATGTGAATGTGGAGAGGGCGGAAGATGTTCTTACGCACAAAAGACTACTACATTTGGCTCATGATCCATCTAATCGACCTGCAGTTGAAATCCGCTTAGTACAGGTAAAATTAACATTCACTACCGCTACTATTGTAAAAGTTCCTTTTTTTTTTTTTTTTTTTAATTTCTCTTCTCCAGAAAGCATCTGCTTTGATTATATTCCGTGCTTGAAAGCTTGTAGCTATTTTTTATTTGTCAGCATCCATCCTCCCCCTTCCTTTGGTTCGTCTGCCAATCTTGAAAGCCTAGCACTCGAAGGCAACAAATCTCAAGAACAAGACGAGGAGCACTCCGTACATGCCAATGCATACTTTTGCAGACCCATGCACGAGATAACCTTCTCCACAGATGACAAGCCAAAACGCCTTAGTCAGTTAACTTCCCTGCTTGCTGAGATTGGGCTCAACATCCAAGAGGCTCATGCATTTTCTACCGCGGATGGCTATTCCTTAGACGTCTTTGTTGTCGATGGCTGGCCATATGAGGAAACGCAGCAATTGAGACTTGCATTAAAGAAGGAAGTCTCAAAAATTGAGAGGGAGGATTCGTCAAATCATGTAACGTCATATCCTGTGCCCGAGCAGCCAAATACGGTGACTACCCCCGAGCAAGATTATGTCACAATACCATCAGACGGAACTGATGTATGGGAAATCGATCACAGACATCTATATTTTGAGAAAAAAATAGCTTCTGGGACATACGGTGATCTGTATAAAGGTACATACCATAGTCAAGAAGTGGCTATCAAAGTCCTCAAGCCCGAGCACGTAACCATAGAAATGCAGCGAGAGTTTGCCCAAGAAGTCTTTATTATGAGAAAAGTTCGGCACAAGAACGTCGTACAGTTTATCGGCGCATGTACTAAACCTCCAAATCTATGCATTGTAACAGAATTTATGTCTGGTGGAAGTTTGTATGACTATTTACACAAACAAAATGGTGTTTTTAAGCTTCCATCTCTGATCAAGGTAGCGATTGATATCTGTAAGGGAATGAACTACTTGCACCAAAATAACATAATTCACAGAGATTTGAAGGCCCCAAATCTTTTGATGAATGAAAATGAAGTTATTAAGGTAGCTGATTTTGGGGTTGCCAGAGTGAAAGCTCAGTCTGGAGTTATGACAGCAGAAACGGGCACATACCGTTGGATGGCTCCCGAGGTCATAGAGCACAAGCCATATGATCATAAGGCTGATATCTTCAGTTTCGGTGTCGTCTTGTGGGAGTTACTTACGGGCAAGATTCCTTACGAATTCATGACCCCGTTACAAGCTGCTGTCGGAGTGGTCCAAAAGGGTTTAAGGCCAACCATTCCAAAAAACACACATCCTAAGCTAACTGAGTTGCTGGAGAAGTGCTGGCAGCAAGACCCAGCCCTGAGACCCGACTTCTCTGATATCATCTCCTTTTTACAGAAAATAGCCAAAGAAGTAAGTCCATCTAGAGTTCAAAAATTGCTTTTTTCTGCAGTTTCAATGCTTCAATTATTCAATCTCTGTTATTAA 1764 43.14 SMLVEDYQSSGPLVQDPPTVAQSRVHRQKYDVYTEVLRRLQESNREEVAQPGFEEELLAHFNRLPARYALDVNVERAEDVLTHKRLLHLAHDPSNRPAVEIRLVQVKLTFTTATIVKVPFFFFFFNFSSPESICFDYIPCLKACSYFLFVSIHPPPSFGSSANLESLALEGNKSQEQDEEHSVHANAYFCRPMHEITFSTDDKPKRLSQLTSLLAEIGLNIQEAHAFSTADGYSLDVFVVDGWPYEETQQLRLALKKEVSKIEREDSSNHVTSYPVPEQPNTVTTPEQDYVTIPSDGTDVWEIDHRHLYFEKKIASGTYGDLYKGTYHSQEVAIKVLKPEHVTIEMQREFAQEVFIMRKVRHKNVVQFIGACTKPPNLCIVTEFMSGGSLYDYLHKQNGVFKLPSLIKVAIDICKGMNYLHQNNIIHRDLKAPNLLMNENEVIKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGVVLWELLTGKIPYEFMTPLQAAVGVVQKGLRPTIPKNTHPKLTELLEKCWQQDPALRPDFSDIISFLQKIAKEVSPSRVQKLLFSAVSMLQLFNLCY 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 40538335 40542942 + Bma008240.2 Bma12g00909 92335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00909 587 ProSiteProfiles ACT domain profile. 195 269 IPR002912 -
Bma12g00909 587 SUPERFAMILY ACT-like 192 263 IPR045865 -
Bma12g00909 587 CDD ACT_TyrKc 193 259 - -
Bma12g00909 587 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 15 568 - -
Bma12g00909 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Bma12g00909 587 MobiDBLite consensus disorder prediction 1 20 - -
Bma12g00909 587 SMART serkin_6 308 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma12g00909 587 CDD STKc_MAP3K-like 314 557 - -
Bma12g00909 587 SUPERFAMILY Protein kinase-like (PK-like) 285 557 IPR011009 -
Bma12g00909 587 Pfam Protein tyrosine and serine/threonine kinase 309 557 IPR001245 GO:0004672|GO:0006468
Bma12g00909 587 PRINTS Tyrosine kinase catalytic domain signature 465 475 IPR001245 GO:0004672|GO:0006468
Bma12g00909 587 PRINTS Tyrosine kinase catalytic domain signature 484 506 IPR001245 GO:0004672|GO:0006468
Bma12g00909 587 PRINTS Tyrosine kinase catalytic domain signature 528 550 IPR001245 GO:0004672|GO:0006468
Bma12g00909 587 PRINTS Tyrosine kinase catalytic domain signature 382 395 IPR001245 GO:0004672|GO:0006468
Bma12g00909 587 PRINTS Tyrosine kinase catalytic domain signature 419 437 IPR001245 GO:0004672|GO:0006468
Bma12g00909 587 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 15 568 - -
Bma12g00909 587 Gene3D Phosphorylase Kinase; domain 1 297 386 - -
Bma12g00909 587 Gene3D Transferase(Phosphotransferase) domain 1 387 578 - -
Bma12g00909 587 Coils Coil 245 265 - -
Bma12g00909 587 ProSiteProfiles Protein kinase domain profile. 308 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma08g00742 Bma12g00909 CCT
Bma03g00620 Bma12g00909 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00265 Bma-Chr2:2816445 Bma12g00909 Bma-Chr12:40538335 2.47E-177 dispersed
Bma02g00273 Bma-Chr2:3146587 Bma12g00909 Bma-Chr12:40538335 0 dispersed
Bma07g01578 Bma-Chr7:51109976 Bma12g00909 Bma-Chr12:40538335 1.41E-50 dispersed
Bma10g00075 Bma-Chr10:773719 Bma12g00909 Bma-Chr12:40538335 1.00E-68 dispersed
Bma11g00795 Bma-Chr11:23180689 Bma12g00909 Bma-Chr12:40538335 1.47E-89 dispersed
Bma02g00714 Bma-Chr2:29988319 Bma12g00909 Bma-Chr12:40538335 0 transposed
Bma14g01847 Bma-Chr14:39510068 Bma12g00909 Bma-Chr12:40538335 2.58E-43 transposed
Bma12g00909 Bma-Chr12:40538335 Bma03g00620 Bma-Chr3:5114687 0 wgd
Bma12g00909 Bma-Chr12:40538335 Bma08g00742 Bma-Chr8:43584343 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66825 PF07714 PK_Tyr_Ser-Thr 3.90E-76 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00909 - - pvy:116144608 806.208