Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00923 ATGGGAATGGGAGCCCTCTTCGACCTTACCTATGCTTCTTCCAGTGTGAAATGGCTGGGTTTTGTGACGGCCGTCTGGGTCCAAGCCATTTCCGGCAATAACTACACTTTCTCAAACTACTCGGATGCGCTTAAGACTCTTATGAATCTTACCCAGCTCGAGCTCAACAATCTCTCCGTCGCCAAGGATGTCGGCAAAGCTTTTGGCCTTCTCGCTGGTCTTGCGTCTGATCAGTTTCCTACTTGGGTCATTCTTCTAATCGGCTCGGTTGAAGGGCTCGTCGGTTATGGCGTCCAGTGGCTAGTCGTCAGCCAGAGAGTTAAACCCCTCCCTTACTGGCAGATGTGTGTCTTCCTCTGCTTGGGAGGCAACAGCACAACGTGGATGAACACGGCGGTGCTGGTGACATGCATCCGAAACTTCCGTAATAACCGAGGCCCGGTCTCCGGCATTCTCAAAGGCTATGTGGGTCTCAGCACTGCCATATTCACCGACATCTGCGCAGCTCTCTTCTCTAGCGACCCATCCTCATTTCTCGTCATGCTCGCCGTCGTTCCCTTTGCGGTTTGCCTCACCGCCATGTTCTTCCTCCGCGAGGTTTCCCCTGCCACAGCCACCGCCGTCGAGCAGGAGGAATCCAGCTATTTTATGTTCTTCAACGCTGTCGCCGTCGTCGTCGCTCTTTTTTTATTATCATACGACTTCGTCTCAAATCCGACCGCTATTTTCTCTCAGCTTTTCTCAATCATGTTGTTGATTCTATTAGCTTCTCCTTTGGCTATTCCCGGGCATTCATTTCTGAAAAGCTGGTACTCTTACCGGATTGCATCGAGTTCTCTGAGGGATATAGAAGGTCGCGCTGAAGAACCATTGCTAAGGGAAGAAACAGCAGAGCAGACAGAAGCAAAGGCGGTGGAAGAAGAGAGTACTGGGAAACCGGTGATCGGAGAGGAGCACACAATTATAGAGGCGATGAAAACGGTAGATTTCTGGATCTTGTTCGTGTCGTTTCTTTGCGGAGTAGGCACAGGGCTAGCCGTGATCAACAATATGGGACAGATAGGATTGGCACTAGGATATGACGATGTTTCGATCTTCGTCTCCCTCACCAGTATTTGGGGCTTCTTTGGCCGTATTCTATCCGGCTCTGTTTCGGAGTACTTTATCAAGAAAGCCGGAACACCAAGACCAGTTTGGAATGCTGCTTCTCAGATCGTGATGGCCGGTGGGTACACTCTAATGGCCATCGCCGTTCCGGGTTCACTCTACATTGGCTCCATTGTCGTCGGAATCTGCTACGGAATCCGAATCGCGATCACAGTTCCGACAGCATCCGAACTCTTCGGACTCAAATACTACGGTCTCATATACAACATTCTCATTCTCAACCTCCCCCTCGGTTCATTCCTTTTCTCCGGCCTACTTGCCGGTATATTATACGACATGGAGGCCACAGCCACGTCTGGAGGGGGGAAATACCTGCGTGGGCAGTCACTGTTATAA 1503 50.83 MGMGALFDLTYASSSVKWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNLSVAKDVGKAFGLLAGLASDQFPTWVILLIGSVEGLVGYGVQWLVVSQRVKPLPYWQMCVFLCLGGNSTTWMNTAVLVTCIRNFRNNRGPVSGILKGYVGLSTAIFTDICAALFSSDPSSFLVMLAVVPFAVCLTAMFFLREVSPATATAVEQEESSYFMFFNAVAVVVALFLLSYDFVSNPTAIFSQLFSIMLLILLASPLAIPGHSFLKSWYSYRIASSSLRDIEGRAEEPLLREETAEQTEAKAVEEESTGKPVIGEEHTIIEAMKTVDFWILFVSFLCGVGTGLAVINNMGQIGLALGYDDVSIFVSLTSIWGFFGRILSGSVSEYFIKKAGTPRPVWNAASQIVMAGGYTLMAIAVPGSLYIGSIVVGICYGIRIAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATATSGGGKYLRGQSLL 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 40776156 40777933 + Bma008258.1 Bma12g00923 92349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00923 500 CDD MFS_Mch1p_like 17 491 - -
Bma12g00923 500 Gene3D MFS general substrate transporter like domains 13 213 IPR036259 -
Bma12g00923 500 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 12 493 - -
Bma12g00923 500 SUPERFAMILY MFS general substrate transporter 27 482 IPR036259 -
Bma12g00923 500 Pfam Nodulin-like 17 262 IPR010658 -
Bma12g00923 500 Gene3D MFS general substrate transporter like domains 288 491 IPR036259 -
Bma12g00923 500 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 493 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00923 Bma-Chr12:40776156 Bma13g00691 Bma-Chr13:19159163 1.42E-111 dispersed
Bma12g00923 Bma-Chr12:40776156 Bma12g00928 Bma-Chr12:40919055 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00923 - - zju:107427514 724.546