Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00928 ATGGGAGCCCTCTTCGACCTTACCTATGCTTCTTCCACTGTGAAATGGCTGGGTTTTGTGACGGCCGTCTGGGTCCAAGCCATTTCCGGCAATAACTACACTTTCTCAAACTACTCGGATGCGCTTAAGACTCTTATGAATCTTACCCAGCTCGAGCTCAACAATCTCTCCGTCGCCAAGGATGTCGGCAAAGCTTTTGGCCTTCTCGCTGGTCTTGCGTCTGATCAGTTTCCTACTTGGGTCATTCTTCTCATCGGCTCGGTTGAAGGGCTCGTCGGTTATGGCGTCCAGTGGCTAGTCGTCAGCCAGAGAGTTAAACCCCTTGCTTACTGGCAGATGTGTGTCTTCCTCTGCTTGGGAGGCAACAGCACAACGTGGATGAACACGGCGGTGCTGGTGACATGCATCCGAAACTTCCGTAATAACCGAGGCCCGGTCTCCGGCATTCTCAAAGGCTATGTGGGTCTCAGCACTGCCATATTCACCGACATCTGCGCAGCTCTCTTCTCTAGCGACCCATCCTCATTTCTCGTCATGCTCGCCGTCGTTCCCTTTGCGGTTTGCCTCACCGCCATGTTCTTCCTCCGCGAGGTTTCCCCTGCCACAGCCACCGCCGTCGAGCAGGAGGAATCCAGCTATTTTATGTTCTTCAACGCTGTCGCCGTCGTCGTCGCTCTTTTTTTATTATCATACGACTTCGTCTCAAATCCGACCGCTATTTTCTCTCAGCTTTTCTCAATCATGTTGTTGATTCTATTAGCTTCTCCTTTGGCTATTCCCGGGCATTCATTTCTGAAAAGCTGGTACTCTTACCGGATTGCATCGAGTCCTCTTAGGGATATCGAAGGTCGCGCTGAAGAACCATTGCTAAGGGAAGAAATAGCAGAGCAGACAGAAGCAAAGGCGGTGGACGAAGAGAGTACTGGGAAACCGGTGATCGGAGAGGAGCACACAATTATAGAGGCGATGAAAACGGTAGATTTCTGGATCTTGTTCGTGTCGTTTCTTTGCGGAGTAGGCACAGGGCTAGCCGTGATCAACAATATGGGACAGATAGGGTTGGCATTAGGATATGACGATGTTTCGATCTTCGTCTCCCTCACCAGTATTTGGGGCTTCTTCGGCCGTATTCTATCCGGCTCTGTTTCGGAGCACTTTATCAAGTATACCGGAACACCAAGACCAGTTTGGAATGCTGCTTCTCAGATCGTGATGGCCGGTGGGTACACTCTAATGGCCATCGCCGTTCCGGGTTCACTCTACATTGGCTCCATTGTCGTCGGAATCTGCTACGGAATCCGAATCGCGATCACAGTTCCGACAGCATCCGAACTCTTCGGACTCAAATACTACGGTCTCATATACAACATTCTCATTCTCAACCTCCCCCTCGGTTCATTCCTTTTCTCCGGCCTACTTGCCGGTATATTATACGACATGGAGGCCACAGCCACGTCTGGAGGGGGAAATACCTGCGTGGGCAGTCACTGTTATAAGGTTGTGTTTATAGTAATGGCGGCTGCGTGTGTGATTGGGTTTTGTTTGGACGTCGTACTGTCGTTTAGGACAAAGACTGTTTACTCCAAGATTCAGGCGAGTATTGAGCAGAAGCAGCTGACTTCTTAA 1626 50.43 MGALFDLTYASSTVKWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNLSVAKDVGKAFGLLAGLASDQFPTWVILLIGSVEGLVGYGVQWLVVSQRVKPLAYWQMCVFLCLGGNSTTWMNTAVLVTCIRNFRNNRGPVSGILKGYVGLSTAIFTDICAALFSSDPSSFLVMLAVVPFAVCLTAMFFLREVSPATATAVEQEESSYFMFFNAVAVVVALFLLSYDFVSNPTAIFSQLFSIMLLILLASPLAIPGHSFLKSWYSYRIASSPLRDIEGRAEEPLLREEIAEQTEAKAVDEESTGKPVIGEEHTIIEAMKTVDFWILFVSFLCGVGTGLAVINNMGQIGLALGYDDVSIFVSLTSIWGFFGRILSGSVSEHFIKYTGTPRPVWNAASQIVMAGGYTLMAIAVPGSLYIGSIVVGICYGIRIAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATATSGGGNTCVGSHCYKVVFIVMAAACVIGFCLDVVLSFRTKTVYSKIQASIEQKQLTS 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 40919055 40920955 + Bma008268.1 Bma12g00928 92354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00928 541 Pfam Nodulin-like 15 260 IPR010658 -
Bma12g00928 541 Gene3D MFS general substrate transporter like domains 289 532 IPR036259 -
Bma12g00928 541 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 538 - -
Bma12g00928 541 SUPERFAMILY MFS general substrate transporter 27 524 IPR036259 -
Bma12g00928 541 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 10 538 - -
Bma12g00928 541 CDD MFS_Mch1p_like 15 512 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00625 Bma-Chr12:27497673 Bma12g00928 Bma-Chr12:40919055 3.21E-80 dispersed
Bma12g00633 Bma-Chr12:27592195 Bma12g00928 Bma-Chr12:40919055 2.97E-79 dispersed
Bma12g00928 Bma-Chr12:40919055 Bma13g00691 Bma-Chr13:19159163 3.46E-123 dispersed
Bma12g00923 Bma-Chr12:40776156 Bma12g00928 Bma-Chr12:40919055 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00928 - - zju:107427514 786.563