Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00957 TCCACTCAATATTCTCTTGCAGAGGCCTATGATTCGCTTGATCCAACGGGAAATATCACTATCAAATGGGATATAATGAGCTGGGCTCCAGATGGTTATGTTGCTGTCGTCACGATGTACAATTTCCAGCAATATCGTCATATTCAAGCCCCGGGTTGGAGTTTAGGGTGGACATGGGCAAAGAAGGAAGTAATCTGGAGCATGGTGGGAGCCCAAACAACAGAGCAAGGAGATTGCTCCAAATTCAAAGGCAATGTTCCCCATTGCTGTAAAAAGGATCCAACAGTTGTGGATTTACTTCCCGGAACACCTTACAACCAGCAGATTGCGAATTGTTGCAAAGGCGGTGTCATAAACTCGTGGGTGCAGGACCCGGCCAATGCAGCCAGCTCGTTCCAGGTCAGCGTTGGTTCGGCCGGAACGACTAACAAAACGGTTAGAGTGCCGAAAAACTTTACACTCAAAGCTCCTGGCCCCGGCTATACTTGTGGGCCTGCAAAGGTCGGGAAACAGACTAAATTTATCTCCGCTGATACGAGAAGAACGACACAAGCTCTGATGACGTGGAACGTTACTTGCACGTATTCGCAATTTCTCGCTCAAAAGACGCCAACCTGTTGTGTTTCTCTCTCGTCCTTCTACAACGACACAATCGTAAACTGCCCAACCTGCACTTGCGGCTGTCAGAACAACATAACAGATCCTGGGAGTTGTGTCGACCCGGATTCTCCATACTTAGCCTCGGTCGTATCGAGTCGTAAATCGAGTAATACTCTCGTTCAGTGTACGAGTCATATGTGTCCGATTAGAGTCCATTGGCACGTGAAGCTCAATTACAAGGAGTATTGGAGGGTGAAGATTACAATCACGAATTTCAACTACCGAATGAATTACACGTTGTGGAATCTCGTCGTTCAACACCCGAATTTTGATAATCTTACTCAGTTGTTCAGCTTTAATTACAAGTCGCTAACTCCCTATGAAGGCTTAAACGATACTGCTATGCTATGGGGCGTCAAGTTTTACAACGATTTGTTGATGGAGGCAGGCCCTCTCGGAAACGTACAATCCGAACTACTGTTCCGAAAAGACAAAAATACGTTTACTTTCGATAAGGGTTGGGCTTTTCCGAGAAGAATTTATTTCAACGGCGATAACTGCGTGATGCCACCTCCAGACGCCTATCCATGGCTGCCTAATACGAGTACCCGGCAAGCCATTTCGATAGTTCATTATTTCATTATTATGGCTGCTTTGGCATTCCTATCGGCCTATGCA 1278 46.24 STQYSLAEAYDSLDPTGNITIKWDIMSWAPDGYVAVVTMYNFQQYRHIQAPGWSLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWVQDPANAASSFQVSVGSAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVGKQTKFISADTRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCQNNITDPGSCVDPDSPYLASVVSSRKSSNTLVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYTLWNLVVQHPNFDNLTQLFSFNYKSLTPYEGLNDTAMLWGVKFYNDLLMEAGPLGNVQSELLFRKDKNTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNTSTRQAISIVHYFIIMAALAFLSAYA 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 41509154 41511404 + Bma030525 Bma12g00957 92383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00957 426 PIRSF COBRA 1 426 IPR006918 GO:0010215|GO:0031225
Bma12g00957 426 PANTHER COBRA-LIKE PROTEIN 2 423 - -
Bma12g00957 426 Pfam COBRA-like protein 33 196 IPR006918 GO:0010215|GO:0031225
Bma12g00957 426 PANTHER PROTEIN COBRA 2 423 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma08g00250 Bma12g00957 CCT
Bma08g00250 Bma12g00957 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00250 Bma-Chr8:3113739 Bma12g00957 Bma-Chr12:41509154 0 dispersed
Bma12g00957 Bma-Chr12:41509154 Bma13g00189 Bma-Chr13:2230022 0 dispersed
Bma12g00957 Bma-Chr12:41509154 Bma14g01050 Bma-Chr14:12514934 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00957 - - jre:109004756 808.905