Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma12g00969 | ATGGCATCGGCGAAGCGATGCCACTACGAGGTCATGGGGCTCTCTCTTGACTGTACGGTGGACGAAATACGATCCGCTTACCGGAAGCTCGCCCTCCAGCGTCATCCGGACAAACTTGTCCAGTCTGGTTTGCCGCCGTCCGACGCCACCGCTCAGTTTCAAGAGCTCCAGCACGCGTACGAGGTGCTCTCCGATCCCAAAGAGCGAGCATGGTATGATTCGCACCGTTCTCAGATTCTCTTCTCCGATCCTAATTCGGCTAATTCCGGGTCCAACTCAGTCGTTCCTGATCTCTTTGCTTTTTTCTCTACTACTGTTCATTCGGGATATTCGGATTCAAAGAAAGGGTTCTATAGGGTTTATTCAGACGTTTTTGATAAAATTTATGCATGTGAATTAAGTTTTGCTAAGAAATTGGGTTTGGGATTAGATTCCGTTCGCGTAGCTCCGACGATGGGGAATTTGGAGAGCCCATACGCGCAGGCAACGGCTTTTTATAGTTACTGGCTTGGATTTTGTACGGTTCTGGACTTCTGCTGGGTGGATCAGTACGATGTGATGGCTGGTCCCAACCGGAAATCAAGGAGGGTGATGGAGGATGAGAACAAGAAGCTAAGAAAGAAGGCCAAGAGGGAGTACAATGACACGGTCAGAGGTTTGGCAGAGTATGTGAAAAAGAGGGATAAAAGAGTAATCGATATGGCTGCAAAGTTGAACTTGGAGATGGAGAAGAAAAGGAAAGAAGAAAAGGATAGAAAGGAGATGTTGAAGAGAGAGAGAACGGAGAGGGCCATGGCTTATGAGGAACCAGACTGGGCTAAAGTTGAAGAGGAAGAGCTGGATGATCTCGGATTTGAAGAAGAGGAGAATAGAAATGGGGGAAAAGAGTTTTATTGTATGTTGTGTGGAAAGAAGTTTAAGAGTGATAAGCAATGGAAGAATCACGAACAGTCAAAGAGGCACAGAGAGAAGGTTGAGGAAATGAAAAAATCACTTGACATTGAGGACGAATTGGGGGAGGTGTCTGAAGAAAGCATGGTTGAAGTGGAGGAAAACAAGGAGTTTGCAGAAGATGAGGTTAGTGGATTGGGGGACAGGCTTATGAAGGACTTCGGTATTGAGGATGATGATGCTAAAAATCTGGCTGCACCAAATGATGAGAATGAGTTTGATGGGGAGCTTGATGTAAGTAGAATGGAAAGTGTCGTTGAAGCAATTGGATCAGACGATGAGGATGGCGAAAGCGGCATGCTTGAAGCAATGGTGGCTGGGCACAAAATTAAGAGGAATGTGACTTCGAGCCAACAACCCAAGGTTTCTTCTAAAGCAATTCATGTTGAAAATGATAGCGACGACGCTGGCTTTATGGAATACGATAATCGAAAGGGAAGAAGAAGGAATCGTAGAGCCAAGAAAGAGAAAGGAAATAGAAATGGTGTAAAAGAGATGGAGGATGATGAGCTCAGAGATAATGAGGAAGCTAATGCCAATGTTAATTCACATATGGAGGAGGGATCTTCATACTCTGAAGAAATTAATGAGAACGATAATAAAGGGAATGATGACTTCTCAAGCAACAGAAAGAATTCAAGTAAACCTACTGATAATCAGTCGAAGACAAAGAATGCCATGTTGACCACTTCCAAGTTATCATCGAAGGGGAAGGACTCTAAGGGAAAATCGAAGAACGCAAGCAACATGTGCGACACGTGTGGAGAGGATTTTGAATCGAGGTAA | 1737 | 44.73 | MASAKRCHYEVMGLSLDCTVDEIRSAYRKLALQRHPDKLVQSGLPPSDATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDPNSANSGSNSVVPDLFAFFSTTVHSGYSDSKKGFYRVYSDVFDKIYACELSFAKKLGLGLDSVRVAPTMGNLESPYAQATAFYSYWLGFCTVLDFCWVDQYDVMAGPNRKSRRVMEDENKKLRKKAKREYNDTVRGLAEYVKKRDKRVIDMAAKLNLEMEKKRKEEKDRKEMLKRERTERAMAYEEPDWAKVEEEELDDLGFEEEENRNGGKEFYCMLCGKKFKSDKQWKNHEQSKRHREKVEEMKKSLDIEDELGEVSEESMVEVEENKEFAEDEVSGLGDRLMKDFGIEDDDAKNLAAPNDENEFDGELDVSRMESVVEAIGSDDEDGESGMLEAMVAGHKIKRNVTSSQQPKVSSKAIHVENDSDDAGFMEYDNRKGRRRNRRAKKEKGNRNGVKEMEDDELRDNEEANANVNSHMEEGSSYSEEINENDNKGNDDFSSNRKNSSKPTDNQSKTKNAMLTTSKLSSKGKDSKGKSKNASNMCDTCGEDFESR | 578 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 41684690 | 41686925 | + | Bma008311.1 | Bma12g00969 | 92395 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma12g00969 | 578 | MobiDBLite | consensus disorder prediction | 428 | 443 | - | - | |
Bma12g00969 | 578 | MobiDBLite | consensus disorder prediction | 526 | 552 | - | - | |
Bma12g00969 | 578 | SMART | ZnF_U1_5 | 294 | 328 | IPR003604 | GO:0003676|GO:0008270 | |
Bma12g00969 | 578 | SMART | dnaj_3 | 6 | 68 | IPR001623 | - | |
Bma12g00969 | 578 | MobiDBLite | consensus disorder prediction | 428 | 578 | - | - | |
Bma12g00969 | 578 | Gene3D | DnaJ domain | 1 | 92 | IPR036869 | - | |
Bma12g00969 | 578 | Coils | Coil | 239 | 259 | - | - | |
Bma12g00969 | 578 | MobiDBLite | consensus disorder prediction | 341 | 361 | - | - | |
Bma12g00969 | 578 | Coils | Coil | 195 | 215 | - | - | |
Bma12g00969 | 578 | Coils | Coil | 346 | 366 | - | - | |
Bma12g00969 | 578 | Pfam | Zinc-finger double-stranded RNA-binding | 297 | 322 | IPR022755 | - | |
Bma12g00969 | 578 | ProSitePatterns | Nt-dnaJ domain signature. | 53 | 72 | IPR018253 | - | |
Bma12g00969 | 578 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 299 | 321 | IPR013087 | - | |
Bma12g00969 | 578 | Gene3D | Classic Zinc Finger | 285 | 344 | - | - | |
Bma12g00969 | 578 | Pfam | DnaJ domain | 8 | 73 | IPR001623 | - | |
Bma12g00969 | 578 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 297 | 326 | IPR013087 | - | |
Bma12g00969 | 578 | SUPERFAMILY | beta-beta-alpha zinc fingers | 285 | 332 | IPR036236 | - | |
Bma12g00969 | 578 | CDD | DnaJ | 7 | 65 | IPR001623 | - | |
Bma12g00969 | 578 | SUPERFAMILY | Chaperone J-domain | 4 | 83 | IPR036869 | - | |
Bma12g00969 | 578 | ProSiteProfiles | dnaJ domain profile. | 7 | 76 | IPR001623 | - | |
Bma12g00969 | 578 | PANTHER | DNAJ PROTEIN JJJ1 HOMOLOG | 1 | 578 | IPR044648 | - | |
Bma12g00969 | 578 | MobiDBLite | consensus disorder prediction | 341 | 355 | - | - | |
Bma12g00969 | 578 | MobiDBLite | consensus disorder prediction | 444 | 463 | - | - | |
Bma12g00969 | 578 | PRINTS | DnaJ domain signature | 48 | 68 | IPR001623 | - | |
Bma12g00969 | 578 | PRINTS | DnaJ domain signature | 27 | 42 | IPR001623 | - | |
Bma12g00969 | 578 | PRINTS | DnaJ domain signature | 9 | 27 | IPR001623 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma12g00022 | Bma-Chr12:731393 | Bma12g00969 | Bma-Chr12:41684690 | 4.05E-16 | dispersed | |
Bma12g00969 | Bma-Chr12:41684690 | Bma14g01313 | Bma-Chr14:23982839 | 6.04E-14 | dispersed | |
Bma12g00969 | Bma-Chr12:41684690 | Bma03g00034 | Bma-Chr3:344089 | 3.65E-10 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58153 | PF00226 | DnaJ | 2.20E-20 | CL0392 | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma12g00969 | K09506 | - | csv:101217729 | 632.869 |