Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00971 ATGCTTCGGAAAATCAGCTCCGTTCATCTGTTTTCCGGCAAGGCTTTAGATGATTTCAGGCATGTCCGTCAGGAAGAAGTAGCGGTGCTGATTCGAACCCTAGCGAGCGCAGGTTCGAAGGCAGTGAATCTGGGACAATTACTCAACGTCTGCACAGCGAACGCACTGGGCCGAGTGATGCTCGGCCACCGCGTTTTCGGCGACGGAAACGGCAGCGTGGACGGGGATCCAAAGGCAGACGAGTTCAAATCGATGGTGGTGGAAGTGATGGTGCTGGCCGGCGTGTTCAACATCGGCGACTTCATTCCGGCGCTTGACGGCCTGGACTTGCAAGGCGTGGCGGGGAAGATGAAGAAACTCCACAAGCGATTCGATGCGTTTTTGGCGAACATCATCGAAGAACACAAGCGGATCGGCGGTGCAGAGCAGTACACCGATATGTTGACTACATTGCTGTCGCTCAAGGAAGAGGCCAACGATGAGGGAGCCAAGCTCACCGACACTGAAATCAAAGCTCTTTTACTGAACATGTTCACAGCGGGAACAGATACGTCGTCGAGTACAGTAGAGTGGGCCATTGCAGAGCTGATCAGACACCCCAAAATCCTAGCCACACTCCAGGAAGAACTCGACTCAGTCGTCGGCGCAGATCGGCTAGTCACTGAGCTAGACTTACCCAAACTCACTTACCTCCAAGCTGTAATTAAAGAAACCTTCCGGCTTCACCCTTCCACTCCACTCTCTCTCCCTCGAATCGCCGCCGAAAGCTGCGAAATCAACGGCTACCACATTCCCAAGGGCGCCACCCTCTTAGTTAACGTTTGGGCAATCGCACGCGATCCTGACGAATGGGTCAACCCGCTCGAGTTCCGGCCAGAGAGGTTTTTACCGGGTGGGGAAAAACCCAACGTTGATGTTAAAGGGAACGACTTCGAGCTCATCCCGTTCGGCGCCGGACGGAGGATATGCGCCGGGATGAGCCTGGGCTTGCGCATGGTTCAGCTACTGACGGCAACCTTGATCCACGCCTTCAAATGGGAGCTGCCGGAGGGGGTGAAAGCAGAGAAGCTTAACATGGAGGAAGCGTATGGACTGACCCTGCAGCGGGCAGATCCTTTGATGGTGCACCCTCGGTCGAGGCTATATCCAAAGGTCTACTAA 1161 54.78 MLRKISSVHLFSGKALDDFRHVRQEEVAVLIRTLASAGSKAVNLGQLLNVCTANALGRVMLGHRVFGDGNGSVDGDPKADEFKSMVVEVMVLAGVFNIGDFIPALDGLDLQGVAGKMKKLHKRFDAFLANIIEEHKRIGGAEQYTDMLTTLLSLKEEANDEGAKLTDTEIKALLLNMFTAGTDTSSSTVEWAIAELIRHPKILATLQEELDSVVGADRLVTELDLPKLTYLQAVIKETFRLHPSTPLSLPRIAAESCEINGYHIPKGATLLVNVWAIARDPDEWVNPLEFRPERFLPGGEKPNVDVKGNDFELIPFGAGRRICAGMSLGLRMVQLLTATLIHAFKWELPEGVKAEKLNMEEAYGLTLQRADPLMVHPRSRLYPKVY 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 41712128 41713508 - Bma008313.1 Bma12g00971 92397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00971 386 Gene3D Cytochrome P450 1 382 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00971 386 PRINTS E-class P450 group I signature 169 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00971 386 PRINTS E-class P450 group I signature 189 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00971 386 PRINTS E-class P450 group I signature 323 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00971 386 PRINTS E-class P450 group I signature 51 69 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00971 386 PRINTS E-class P450 group I signature 273 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00971 386 PRINTS E-class P450 group I signature 232 250 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00971 386 PRINTS E-class P450 group I signature 313 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00971 386 PANTHER FLAVONOID 3'-MONOOXYGENASE 1 378 - -
Bma12g00971 386 SUPERFAMILY Cytochrome P450 2 380 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00971 386 PRINTS P450 superfamily signature 314 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00971 386 PRINTS P450 superfamily signature 233 244 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00971 386 PRINTS P450 superfamily signature 323 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00971 386 PRINTS P450 superfamily signature 180 197 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00971 386 Pfam Cytochrome P450 2 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00971 386 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 316 325 IPR017972 GO:0005506|GO:0016705
Bma12g00971 386 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 378 - -
Bma12g00971 386 Coils Coil 141 161 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00854 Bma-Chr9:47568690 Bma12g00971 Bma-Chr12:41712128 2.80E-70 dispersed
Bma12g00971 Bma-Chr12:41712128 Bma09g00984 Bma-Chr9:49367464 2.97E-112 dispersed
Bma12g00971 Bma-Chr12:41712128 Bma08g00238 Bma-Chr8:2919290 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00971 K05280 - qsu:112039462 636.721