Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g01012 TTTGCAGAGATGAACATGAATATCCAGACTCTGACCACCAAATGGATCGCTATTGTGGCGAGCATATGGATCCAGTGCTCCACCGGTTCGTCCTACACCTTCAGCATCTATTCCTCCGCTCTCAAATCCACCCAGAATTATGACCAATCCACTCTCGACACCGTTTCCGTCTTCAAGGATATTGGGGCGAACGCCGGAATCCTTTCGGGTCTGCTTTACTCCGCTGTTACGCCCAGTAATTCCCGTCTTCCGTCGAGATTCCTCAGTGGCCCGTGGGTAGTCCTGGTGGCGGGGTCGGTCCAGTGCTTCGCCGGCTACTTTTTTATGTGGGCTGCAGTCTCTGGGATGATTCAGAGGCCTCCGGTGCCGGTGATGTGCTTGTTCATGTTTTTAGCGGCGCATGCCCAAACCTTTTTCAATACTGCCAATGTGGTTACCGGCCTTTACAATTTTGGTCAGTATGGTGGAACCATTGTGGGTATAATGAAGGGGTTTCTTGGTCTCAGTGGAGCAATCCTCATTCAATTGTACAGTACTGTATGCAAAGGAGAGCCGAGCACTTATCTTCTTATGCTCGCTTTGTTGCCTACGTGTCTCTCTCTCTCTCTCATGTGTCTGGTGAGAATTGACAAATCAAATGGTGTTAATGAGAAGAAGCACTTAAATGGTTTTTCTGCTAATGCCTTAATCATTGCTGGCTATCTCATGGCGATAATAATATTGCAAAACATCATTACTTTCCCATTTTGGGCGAGTATTTTGACGTTCATCATTCTCTTGGGTCTACTTGCTTTACCTCTTGGAATTGGAATCAATGCTAGGAGGGAACAGTTAAACAGATCTTTACTCTCATTATCCGCCAATCAAAATCCTCTGATGGACAGCTTGGAGCCAATGCCATCCTCCAAGTTTCCTAATGCAGAGAGTTCTGTAAAATATCACGAGCTGCCTTCTGATGAGGGTAAAATGACGGATAGTATCAGTGACAAAATGCCAACCGATGAAGAGGGTATGAATATCTTGCAAGCCATGTGTTCGGTAAATTTTTGGCTATTGTCTCTTGCCATGGTGTGCGGAATGGGGTCTGGTCTGGCAACAATAAACAACATGAGCCAAATCGGCCAATCTCTTGGTTACAGCACAGTAGAGATTAACACATTTGTTTCCTTGTGGAGTATATGGAATTTTCTCGGCCGTTTCGGGGCTGGTTTTTTGTCCGATTACCTTCTCCATACTGCAGGCTGGGCAAGGCCATTGTTAATGGCGATAACTTTAGCGACTATGAGTGTAGGACACTTGATCATCGCGTCTGGAATTTCGGGAACTTTATACGTTGGTTCGGTCCTCGTGGGTATTTGCTATGGTTCGCAGTGGTCCCTTATGCCCACCATCACTTCAGAGATATTTGGGATGGAGCATATGGGAACCATTTTCAACACCATAGCCGTGGCAAGTCCCGTTGGATCGTACATCTTTTCAGTAAGAGTGATTGGATATATTTACGATAAAGAAGCCGCGGAAGCGGATAATACTTGCTCGGGTACTCACTGCTTTATGCTGTCTTTCATTGTCATGGCGTCTGTTGCTCTGTGCGGGTGTTTTGTTGCCGTTGCTCTGTTCTATCGGACTAGGCGGCTGTATCAGCTGATTGTGCTTAGAAGATTTAAGAAATCTCCCAGACAATGA 1686 46.09 FAEMNMNIQTLTTKWIAIVASIWIQCSTGSSYTFSIYSSALKSTQNYDQSTLDTVSVFKDIGANAGILSGLLYSAVTPSNSRLPSRFLSGPWVVLVAGSVQCFAGYFFMWAAVSGMIQRPPVPVMCLFMFLAAHAQTFFNTANVVTGLYNFGQYGGTIVGIMKGFLGLSGAILIQLYSTVCKGEPSTYLLMLALLPTCLSLSLMCLVRIDKSNGVNEKKHLNGFSANALIIAGYLMAIIILQNIITFPFWASILTFIILLGLLALPLGIGINARREQLNRSLLSLSANQNPLMDSLEPMPSSKFPNAESSVKYHELPSDEGKMTDSISDKMPTDEEGMNILQAMCSVNFWLLSLAMVCGMGSGLATINNMSQIGQSLGYSTVEINTFVSLWSIWNFLGRFGAGFLSDYLLHTAGWARPLLMAITLATMSVGHLIIASGISGTLYVGSVLVGICYGSQWSLMPTITSEIFGMEHMGTIFNTIAVASPVGSYIFSVRVIGYIYDKEAAEADNTCSGTHCFMLSFIVMASVALCGCFVAVALFYRTRRLYQLIVLRRFKKSPRQ 561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 42196598 42199376 + Bma008360.1 Bma12g01012 92438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g01012 561 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 558 - -
Bma12g01012 561 SUPERFAMILY MFS general substrate transporter 230 545 IPR036259 -
Bma12g01012 561 Gene3D MFS general substrate transporter like domains 341 548 IPR036259 -
Bma12g01012 561 CDD MFS_Mch1p_like 14 533 - -
Bma12g01012 561 Pfam Major Facilitator Superfamily 352 544 IPR011701 GO:0022857|GO:0055085
Bma12g01012 561 Pfam Nodulin-like 14 269 IPR010658 -
Bma12g01012 561 PANTHER F25A4.25 PROTEIN 10 558 - -
Bma12g01012 561 SUPERFAMILY MFS general substrate transporter 10 208 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00359 Bma-Chr3:2654455 Bma12g01012 Bma-Chr12:42196598 3.65E-110 dispersed
Bma08g00921 Bma-Chr8:48186928 Bma12g01012 Bma-Chr12:42196598 4.98E-98 dispersed
Bma11g00195 Bma-Chr11:1750042 Bma12g01012 Bma-Chr12:42196598 1.10E-106 dispersed
Bma12g01012 Bma-Chr12:42196598 Bma13g00691 Bma-Chr13:19159163 2.46E-84 dispersed
Bma12g01012 Bma-Chr12:42196598 Bma03g00062 Bma-Chr3:512202 3.71E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g01012 - - qsu:112039582 759.985