Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g01032 ATGAAGGAAAACGGGGATGGGTTTGTGAGGGCAGATCAGATTGATCTGAAGAGCTTGGATGAGCAGCTGGAGAGGCATCTAAACAGAGCCTGGACGATGGAGAAGATCAGGAAGAAAGAAGAAGAAGATGGAAATGGCGTTTCGACTACCGAAACCGGTCTCGGAAAAGGGGCGAAAGTGGCGGCGAAGAAGGAGAGGCAAGACTGGGAAATTGACCCATCGAAGTTGATAATCAAGAGCGTCATTGCTCGTGGCACTTTTGGCACCGTCCACCGCGGTTTCTACGACGGCCAAGATGTCGCCGTTAAATTGCTCGAGTGGGGAGAAGAAGGTCACAGGACCGAATCCGAGATTACAGCTCTAAGAGCAGCATTCCAACAAGAAGTTGCTGTTTGGCATAAACTCGATCATCCTAACGTTACGAAGTTTATAGGGGCAACAATGGGGTCATCTGAATTACAGATTCAAACCGAAAACGGTCAAATTGCTATGCCGAGTAACGTATGCTGTGTTCGTAGTGGAATATCTTCCGGGTGGTGCTCTCAAATCTTACCTCATAAAAAACAGGAGGAAGAAGCTACCTTTTAA 588 47.62 MKENGDGFVRADQIDLKSLDEQLERHLNRAWTMEKIRKKEEEDGNGVSTTETGLGKGAKVAAKKERQDWEIDPSKLIIKSVIARGTFGTVHRGFYDGQDVAVKLLEWGEEGHRTESEITALRAAFQQEVAVWHKLDHPNVTKFIGATMGSSELQIQTENGQIAMPSNVCCVRSGISSGWCSQILPHKKQEEEATF 195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 42403872 42405468 - Bma008380.1 Bma12g01032 92458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g01032 195 Pfam Protein tyrosine and serine/threonine kinase 78 158 IPR001245 GO:0004672|GO:0006468
Bma12g01032 195 ProSiteProfiles Protein kinase domain profile. 76 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma12g01032 195 SUPERFAMILY Protein kinase-like (PK-like) 66 158 IPR011009 -
Bma12g01032 195 MobiDBLite consensus disorder prediction 37 59 - -
Bma12g01032 195 PANTHER - 1 172 - -
Bma12g01032 195 Gene3D Phosphorylase Kinase; domain 1 64 160 - -
Bma12g01032 195 Coils Coil 188 195 - -
Bma12g01032 195 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 172 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00626 Bma-Chr9:43610895 Bma12g01032 Bma-Chr12:42403872 1.58E-51 dispersed
Bma12g01032 Bma-Chr12:42403872 Bma06g01565 Bma-Chr6:51936843 5.15E-56 dispersed
Bma01g00983 Bma-Chr1:9679366 Bma12g01032 Bma-Chr12:42403872 1.50E-86 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66827 PF07714 PK_Tyr_Ser-Thr 1.50E-07 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g01032 - - sspl:121797192 274.248