Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g01060 ATGAAAAGTTGTTCCTCAGAACCCAAGTATCAGCCTGAAACTACTAGTTTGCCTTCTATTGAACTCCGCAAAGACGGTTCCCCAGAAATTCTTGATGGAGAGTCTGCATGTGATAGGGTTGACTCAAAGGATAGAACAATTGATTGTTCTGTCGAGTACAACACTAAAGAAATCAGTTTCCAAAAGCCAAATGTTTTGGCAGGTAGATTTAGAGATTCAACCATTGCAGCATCACATCCAGTTCAAAGTGCCGTCACAGATGATTATGATGGAAAGTCTAAGTTTGGTGAGGCTAATTTGCCAGTGGGAAGTGAAACCATGTCATTTGTTCAAAAATCCAATGAAGATTCTTCAAGGTCGCACGTTTTCTGCCTTGAGCATGCTATACAAGTAGAAAAGCAACTTCGCGAAATAGGAGGAGTGCATATACTGCTCTACTGTCATCCAGACTATCCAACAATAGAGGGGGAAGCTAAAGCTCTTGCAGAAGAAATGGGTATAGATTATCCCTGGAATGCAATCAAATTCCAACAAGCTAGCAAAGAGGATGAAGAGAGGATCCACTCAGCTTTGGATAGCGAAGAATCTATTCCTGGAAATGGAGACTGGGCTGTAAAGCTTGGCATCAATCTCTTTTACAGTGCAAATCTCTGCCGATCTTCTCTTTATAGTAAGCAGATGCCATACAACTCTGTGATATACCGTGCATTTGGCCGAAGCTCTTCAACCACCTTATCCACTAAACCCAACTTCACCAAGAAAAGATCTACCAGGTGCAGGAAGGCATTTGTTGGGAAATGGTGTGGAAAAGTTTGGACTTCAAATCAGGTTCATCCTCTCCTAAACAGGAAAGAAAACGAAGAAGAAGAGGAAGACGATGACGACGACGACTTGCCCTTCCATGAATGGGAAATGCCAGCTGAGAAAAAATCGAGCAGAATCGGAAAATCCGTGGCAAATTTAGCAACTAAAATGACTCGTAGTAAAAGAAAATTGACTTCTGGTGGTGGTTCAACCAAGAAAAAGAAACGTGTATGTTCTGATGATGTGGCATCAGATGATTTGTCACCAGGTGATGGGTCAAATCAGTTTCATCCTCTTCTTTCTAAGAAAGATTATGAAGGGGAAGAGGAAGGAGAAGAGGAAGTAGACGAGTATGAATCGCGGTTCCATGCTTGGGAAATGTCAGTTGAGAGAAAATCTAGAGGCATCAGAAAATTCGAGCCAAAATCTGGGGCAAATTCAAATGCTAAAAAGGGTGGTAGTAAGAGAAAATCGACTGCTGGGGGTGGGTCAATCAAGAAATCAAATAAATTATGCACTGATGTAGTGCCAGATGATCTGATCGAAGATCTTCGTCGGCAGCGGAGGAGGATTCTTAGAAGCAATTGTCCGTTGAGAGGAATTCTGATAATCTATCAGAGGAAAACTCTTCTCAGCTACAAAAAAAGATTTCTGTTGGCAAGCTAG 1470 41.84 MKSCSSEPKYQPETTSLPSIELRKDGSPEILDGESACDRVDSKDRTIDCSVEYNTKEISFQKPNVLAGRFRDSTIAASHPVQSAVTDDYDGKSKFGEANLPVGSETMSFVQKSNEDSSRSHVFCLEHAIQVEKQLREIGGVHILLYCHPDYPTIEGEAKALAEEMGIDYPWNAIKFQQASKEDEERIHSALDSEESIPGNGDWAVKLGINLFYSANLCRSSLYSKQMPYNSVIYRAFGRSSSTTLSTKPNFTKKRSTRCRKAFVGKWCGKVWTSNQVHPLLNRKENEEEEEDDDDDDLPFHEWEMPAEKKSSRIGKSVANLATKMTRSKRKLTSGGGSTKKKKRVCSDDVASDDLSPGDGSNQFHPLLSKKDYEGEEEGEEEVDEYESRFHAWEMSVERKSRGIRKFEPKSGANSNAKKGGSKRKSTAGGGSIKKSNKLCTDVVPDDLIEDLRRQRRRILRSNCPLRGILIIYQRKTLLSYKKRFLLAS 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 42768791 42770758 - Bma008409.1 Bma12g01060 92486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g01060 489 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 96 353 - -
Bma12g01060 489 MobiDBLite consensus disorder prediction 282 387 - -
Bma12g01060 489 MobiDBLite consensus disorder prediction 404 436 - -
Bma12g01060 489 MobiDBLite consensus disorder prediction 1 21 - -
Bma12g01060 489 PANTHER LYSINE-SPECIFIC DEMETHYLASE 96 353 - -
Bma12g01060 489 MobiDBLite consensus disorder prediction 316 333 - -
Bma12g01060 489 MobiDBLite consensus disorder prediction 286 301 - -
Bma12g01060 489 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00075 Bma-Chr3:589927 Bma12g01060 Bma-Chr12:42768791 5.78E-17 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g01060 - - qlo:115962788 325.865