Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g01071 ATGGCTAGAATATACGACAACTGGGAGAGGCTTGTGCGAGAGACCTTGAAGAGAGAACAGCTCAGAAGTGCTGGGCAAGGTCATGAGAGAACTTCCAGTGGGATTGCCGGAGCTGTTCCGCCATCGCTCGGTAAAAGCACGAACATCGAAACGATTTTACAGGCTGCTGATGAGATCCAATCGGAGGATCCAAATTGTGCGAGAATTTTGTGTGAGCAGGCATATAGAATGGCACAAAACTTGGATCCTAATAGCGATGGTAGAGGTGTTCTCCAGTTTAAAACTGGTTTGATGTCTGTTATTCAGCAAAAGATTTCCAAGAAAAAGGATGGGACACCTATAGATCGAAATCGTGATATTGAATACTTGTGGGAGTTTTACCAGCGCTATAAGATTCAACACAGAGTGGATGATCTACGGAGAGAGGAACAAAAATGCCGCGAATCTGGAGTGTTGAGTGATAATTTGGGAGAATTTGGACTCCAATATAGAGAAACTAAAAAAGTAATTGCTATCACGAGGGCTTTAGTTGAGGTTATGGAGGTGCTGAGCAAGGATGCAGATCCCCATGGAGTTGGAAAACTGATTATCGAGGAGTTACGAAGAATTAAAAAATCTGATGCAACTTTATCTGGGGGGCTTGCACCCTATAATATTATTCCTTTGGAGGCACCATCACTAACCAATCTTATTGGAGTTTTTCCCGAGGTGAAAGGAGCGATATCTGCAATTAGATATACTGAACACTTCCCTAGACTTCCTGTTGATTACGAGATTTCAGCAGATAGAAATGCAGACATGTTTGATCTCTTGGAGTATGCATTTGGTTTTCAGGATTTAGTCAGTACTACCCTTGTGCATAGATTTCATTTTTCTTTCCCCCCAATCTCAACATCCTGGTGTTTATATCCGAGTGTCTCGTGTAACTATAAAATTGACGAGAGAGCAGTTAATGAGGTTTTCCTGAAAGTGCTTGATAACTACATCAAATGGTGTAGATACTTGCGGAAACGGGTTGTATGGAATAGCATAGAGGCAATTAATAGGGATAGGAAACTTTTTCTGGTTTCATTGTACTTCCTTATATGGGGTGAAGCTGCAAATGTCCGTTTCCTTCCTGAATGCATTTGCTACATTTTTCACCATATGGCTGAGGAGTTGGATGCAATCTTGGATCATGGAGAAGCTTTTCGTCCTTCTGGCTGTAAAATGGAGGATGGTTCAGCGTCTTATCTTCAACAAGTCATATGTCCTATATACAAAACCCTGGAAGAGGAATCTAAAAGAAATAATAATGGGACAGCTGCTCATTCAGCTTGGCGAAACTATGATGACTTCAATGAATACTTTTGGTCACCTACTTGCTTTGAGTTGAAATGGCCAATGGAGAGGGGGTCCTCTTTTTTACGATCACCAAAAGGCTCAAAAAGGACTGGTAAAACTACTTTTGTTGAGCATCGTTCATTTCTCCACTTGTATCGAAGTTTTCATCGTCTTTGGATATTTTTGGTTCTAATGTTTCAGGGTTTGACAATTGTTGCCTTTAATGACGACAATGTCAATTTGGATACATTTAAACTTCTTCTGAGCCTTGGATTGACATTCACCATCATGAACTTTGTAGAGAGTGCTTTGGATGTCTTGTTTATGTTTGGGGCGTACACCACTGCAAGAGGCATGGCTATCTCAAGGCTAGTTATTAGGTTCTTCTGGTGGGGCTTGAGCTCCGCCTTTGTAACATATGTTTATCTGAAGGTTCTTCAGGAAAGAAATCAAAATTCAGATAATTCATTGTATTTCCGGATATATGTTATCGTGTTCGGGGTCTATGCTGGCTTGAGGCTTTTTCTTGCACTGTTGCTTAAATTTCCTGCTTGTCATAAATTTTCCGAGATGTCTAATCAGTCATTCTTTCAATTTTTTAAATGGATATATCAGGCAAGCTCTACTAATATTTCTAAATATAAATATTTTTTCACTCGGTCGGAGCGGTATTATGTTGGCCGTGGTCTTTATGAAAGAATGGGTGACTATTGCAGGTTTGTCATTGGGATTTTAGAACTTACATATTTATTGATGAATTTGGTCGTTTATTTTATTCTGCAGATAAAACCACTAGTTGAACCAACAAGAATTATTGCCAATCTTCGTACTCTTAGCTACTCATGGCATGATTTGATCTCAAAGAACAATAATAATATCTTGACCATTGCCAGCTTATGGGCTCCTGTTGTTGCTTTATATCTAATGGACATATATATATGGTACACAATCTTGTCAGCCATTCTTGGAGGTGTAAAAGGAGCACGTGCTCGTTTAGGAGAGATACGTTCCCTTGAAATGGTGCATAAACGTTTCGAGAGCTTTCCAGAAGCATTTGTAAAGAATCTCCTTATTATAAATTTGAACCATCTAGATTCACCTGATATGAACAAGACACATGCGGTCAATTTTTCTCCTTTTTGGAATGAGATAATTAAAAGCTTGCGAGAGGAAGACTATATTAGTAATAGGGAAAGAGACTTGCTTTCAATGCCCAGCAATACAGGAAGTCTCAGACTAGTCCAGTGGCCTTTATTCCTCCTAAGCAGTAAGATTTTGCTGGCGGTTGATTTAGCTTTGGACTGCAAGGATACTCAGAGAGATTTATGGAATAGAATATGCAGGGACGAATATATGGCATATGCAGTTCAGGAATGTTACTATGGTGTTGAAAAAATTTTATATTCCCTTGTTGATGGTGAAGAAGGGAGACTCTGGGTTGAACGAGTTTTACGTGATGTCAACAATAGTATTGGGGAAGGTTCTCTTGTTATTACAGTGTTTCTTAATAAGCTCCCACTTGTCATATCAAGATTTACGGCATTGACAGGGCTTCTGACTCGTAGTGAAACTCCTGAGCTTGCAAAAGGAGCAGCAAAAGCTTTATATGATTTCTATGAGGTCGTTACACATGATTTCCTTTCATCTGATTTGAGAGAGCAGCTTGACACTTGGAACATTTTGTTGAGAGCTAGAAATGAAGGTCGATTGTTTTCCCTGATAAAATGGCCAAAGGATCTTGAAATAAAAGAACTAGTGAAGCGCTTGCACCTCCTTCTCACGGTAAAGGACTCTGCTGCTAATATCCCAAAAAATCTTGAAGCCAGGAGAAGATTAGAGTTCTTTACCAATTCATTATTTATGAAGATGCCCCCCGCAAAGCCAGTTAGCAAGATTATGTCATTTAGTGTCTTCACTCCATACTATAGTGAAACTGTCCTCTATAGTTCTTCTGAATTGCGGATGGAAAATGAGGACGGCATATCCATTCTTTTCTATTTGCAGAAAATTTTTCCAGATGAGTGGGAAAACTTTTTGGAACGAATTGGCCGTGGTGAATCTACCGGAGAAGATGAACTTCAACAAAATACCAGTGATTCTCTGGAGCTTCGGTTTTGGGTTTCTTATAGGGGCCAGACACTTGCTAGGACCGTTCGTGGGATGATGTACTATAGGAGAGCTTTAATGCTACAAAGTTATTTGGAGATGAGATCTTTTGGAGTGGATGACATTGCTAAAACCAACTTCCCAACAAGTCAAGGTTTTGAATTATCCCGCGAATCAAGGGCACAAGCAGACTTGAAGTTTACATATGTGGTGTCTTGCCAAATTTATGGGCAGCAAAAACAGAGAAAGGCTCCAGAGGCAACTGATATTGCTCTTTTGCTTCAGAGGAATGAAGCACTTCGAGTGGCTTTCATCCATGTAGAAGAAAGTGGTGCTGATGGAAAGGTTGAGAAGGCATTTTATTCGAAGCTTGTAAAAGCTGACATAAATGGAAAAGATCAGGAAATCTATTCCATCAAACTTCCTGGAGATCCAAAGCTAGGAGAAGGGAAACCTGAGAACCAAAACCATGCTATAATATTCACGCGCGGAGATGCTGTACAGACTATTGACATGAATCAGGACAATTACCTTGAGGAAGCAATGAAAATGAGGAACCTACTTGAAGAATTTCACGAGAATCATGGACTTCGACCCTCAACTATCCTTGGTGTGAGAGAGCATGTTTTTACCGGCAGTGTCTCTTCTTTAGCGTGGTTCATGTCCAATCAAGAAACTAGCTTTGTAACCTTGGGGCAACGTGTCTTGGCAAGCCCTCTCAAGGTCCGAATGCACTATGGCCATCCTGATGTCTTTGATCGAATCTTTCACATAACTCGAGGAGGCATTAGTAAGGCATCACGAGTTATAAACATTAGTGAGGATATTTATGCAGGTTTCAACTCTACATTGAGACAGGGTAACATTACACACCATGAATATATTCAGGTGGGAAAAGGAAGGGATGTTGGGTTGAACCAGATTGCGCTGTTTGAGGGCAAAGTTGCTGGTGGGAATGGAGAGCAAGTCCTGAGCAGGGATGTGTATAGGCTTGGACAGCTTTTTGATTTTTGTAGAATGCTCTCCTTTTACTTCACAACTGTTGGTTACTACGCTTGCACAATGATGACTGTACTTGTAGTTTACATATTCTTGTATGGAAGGGTTTACCTGGCTCTTTCTGGACTTGATGAGCAAATCTCTCGAGAAGCAATATCGCTAGGAAACACAGCATTGGATGCAGTTTTGAATGCCCAATTTTTGATGCAGATTGGTATATTTACTGCAATTCCAATGCTGGTTGGTTTTATTCTTGAGATGGGATTACTGAAGGCCATTTTCAGTTTTATAACAATGCAGCTTCAGCTATGTTCTGTCTTCTTCACATTCTCACTAGGAACCAGAACTCATTATTTTGGACGTACTATTCTACATGGTGGTGCAAAGTACCGGGCAACTGGTAGAGGCTTTGTCGTCCGTCACATCAAATTTGCTGAAAATTATCGGCTGTATTCAAGAAGTCATTTCATTAAGGCGCTTGAAGTTGCACTACTTCTTATTGTCTACATCGCATATGGATACAACAAAGGAGGTGCTACTTCTTTTATTTTGATCACTCTGAGCAGTTGGTTCCTTGTCGTCTCCTGGCTCTTTGCTCCTTACATCTTTAATCCCTCTGGATTTGAATGGCAAAAGACGGTGGAGGATTTTGATGATTGGATAAGCTGGCTTTTGTACAAAGGAGGGGTGGGTGTGAAGGGAGACAACAGTTGGGAATCCTGGTGGGAAGAAGAACAGATGCACATCCAAACATTAAGAGGTCGTATCTTGGAGACAATTTTGACGTTGAGATTCTTCATATTTCAATATGGCATAGTGTACAAACTTCATATCACGGGAAAGAATACATCGCTCGCGATTTATGGCTTCTCCTGGCTCGTATTGATTGCCATCGTCTTGATATCTAAGATCTTTACTTTCAGTCCTAAAAAATCAACAAACTTCCAGCTGTTGATGAGATTTATACAGGGTGTCACAGCATTAACAATGGTTGCAGCTGTAATTCTCTTTGTTGTCTTTACTGGTCTTTCAATAGCAGATTTGTTCGCGGGGCTTCTAGCATTTATTGCTACTGGATGGGCTATATTATGTTTGGCAATCACATGGAAGGGCATTGTAAGGCATCTCGGCTTATGGGATTCCGTGCGGGAATTTGCCAGAATGTATGACGCTGGGATGGGTATGTTAATTTTCGTCCCAATAGCGCTATTGTCGTGGTTCCCCTTCATTTCCACGTTCCAATCTCGCCTTCTCTTCAACCAAGCATTTAGCCGCGGGCTCGAGATTTCTCTCATCCTTGCTGGCAACAAAGCAAATGTCCAAACCTGA 5757 40.7 MARIYDNWERLVRETLKREQLRSAGQGHERTSSGIAGAVPPSLGKSTNIETILQAADEIQSEDPNCARILCEQAYRMAQNLDPNSDGRGVLQFKTGLMSVIQQKISKKKDGTPIDRNRDIEYLWEFYQRYKIQHRVDDLRREEQKCRESGVLSDNLGEFGLQYRETKKVIAITRALVEVMEVLSKDADPHGVGKLIIEELRRIKKSDATLSGGLAPYNIIPLEAPSLTNLIGVFPEVKGAISAIRYTEHFPRLPVDYEISADRNADMFDLLEYAFGFQDLVSTTLVHRFHFSFPPISTSWCLYPSVSCNYKIDERAVNEVFLKVLDNYIKWCRYLRKRVVWNSIEAINRDRKLFLVSLYFLIWGEAANVRFLPECICYIFHHMAEELDAILDHGEAFRPSGCKMEDGSASYLQQVICPIYKTLEEESKRNNNGTAAHSAWRNYDDFNEYFWSPTCFELKWPMERGSSFLRSPKGSKRTGKTTFVEHRSFLHLYRSFHRLWIFLVLMFQGLTIVAFNDDNVNLDTFKLLLSLGLTFTIMNFVESALDVLFMFGAYTTARGMAISRLVIRFFWWGLSSAFVTYVYLKVLQERNQNSDNSLYFRIYVIVFGVYAGLRLFLALLLKFPACHKFSEMSNQSFFQFFKWIYQASSTNISKYKYFFTRSERYYVGRGLYERMGDYCRFVIGILELTYLLMNLVVYFILQIKPLVEPTRIIANLRTLSYSWHDLISKNNNNILTIASLWAPVVALYLMDIYIWYTILSAILGGVKGARARLGEIRSLEMVHKRFESFPEAFVKNLLIINLNHLDSPDMNKTHAVNFSPFWNEIIKSLREEDYISNRERDLLSMPSNTGSLRLVQWPLFLLSSKILLAVDLALDCKDTQRDLWNRICRDEYMAYAVQECYYGVEKILYSLVDGEEGRLWVERVLRDVNNSIGEGSLVITVFLNKLPLVISRFTALTGLLTRSETPELAKGAAKALYDFYEVVTHDFLSSDLREQLDTWNILLRARNEGRLFSLIKWPKDLEIKELVKRLHLLLTVKDSAANIPKNLEARRRLEFFTNSLFMKMPPAKPVSKIMSFSVFTPYYSETVLYSSSELRMENEDGISILFYLQKIFPDEWENFLERIGRGESTGEDELQQNTSDSLELRFWVSYRGQTLARTVRGMMYYRRALMLQSYLEMRSFGVDDIAKTNFPTSQGFELSRESRAQADLKFTYVVSCQIYGQQKQRKAPEATDIALLLQRNEALRVAFIHVEESGADGKVEKAFYSKLVKADINGKDQEIYSIKLPGDPKLGEGKPENQNHAIIFTRGDAVQTIDMNQDNYLEEAMKMRNLLEEFHENHGLRPSTILGVREHVFTGSVSSLAWFMSNQETSFVTLGQRVLASPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDVYRLGQLFDFCRMLSFYFTTVGYYACTMMTVLVVYIFLYGRVYLALSGLDEQISREAISLGNTALDAVLNAQFLMQIGIFTAIPMLVGFILEMGLLKAIFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFIKALEVALLLIVYIAYGYNKGGATSFILITLSSWFLVVSWLFAPYIFNPSGFEWQKTVEDFDDWISWLLYKGGVGVKGDNSWESWWEEEQMHIQTLRGRILETILTLRFFIFQYGIVYKLHITGKNTSLAIYGFSWLVLIAIVLISKIFTFSPKKSTNFQLLMRFIQGVTALTMVAAVILFVVFTGLSIADLFAGLLAFIATGWAILCLAITWKGIVRHLGLWDSVREFARMYDAGMGMLIFVPIALLSWFPFISTFQSRLLFNQAFSRGLEISLILAGNKANVQT 1918
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 42888248 42937043 + Bma008418.1 Bma12g01071 92497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g01071 1918 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 2 1916 - -
Bma12g01071 1918 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 352 460 IPR026899 -
Bma12g01071 1918 Gene3D - 35 185 IPR023175 -
Bma12g01071 1918 SMART FKS1_dom1_2 350 463 IPR026899 -
Bma12g01071 1918 MobiDBLite consensus disorder prediction 19 41 - -
Bma12g01071 1918 Pfam 1,3-beta-glucan synthase component 1043 1820 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Bma12g01071 1918 PANTHER BNAC03G35120D PROTEIN 2 1916 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00010 Bma-Chr5:1620353 Bma12g01071 Bma-Chr12:42888248 0 dispersed
Bma12g01071 Bma-Chr12:42888248 Bma14g00713 Bma-Chr14:7792542 0 dispersed
Bma12g01071 Bma-Chr12:42888248 Bma03g01022 Bma-Chr3:11365389 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g01071 K11000 - csv:101217890 3123.18