Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g01151 ATGGAAGAGAAGGAGAATTTAGGTTCTGGTTTTGCTCTTAAGGGTGATGAAGCTCCAGATGGCTATCAGGTTGCTGCGAGATCCGAAAACCCGAACCCGATTGTCGTCCATACGGTTGCTGCTGCTGAGCCAGTTGCAGATGCTGTATCGCCGGCGAGTGCGGCGGTGACGGCGACGGATGGGAAGAAAAAGAGGGGCAGGCCGAGAAAGTACGATACGAACGGAAAGGTAATACTGGCGCTATCGCCGATGCCGATTTCAGCGTCCATTCCGCTCACCGGAGAATACTCTGCTTGGAAAAAAGGTAGAGGAAAGCCATTGGAGTCGGTCAAGAAGTCGCACAAGTTTGTTTTTGGAACTCCTGGAGAGAGAATTGCGTACTCGGTCGGGGCAAATTTCACTCCTCATATGATCACGGTTAATCCTGGGGAGGATGTTACAATGAAGATTATGGCCTTCTCTCGACAAGGCTCTCGAGCAATTTGTATACTCACCGCCAATGGTACGATCTCGAGTGTCACTCTCCGGCAGCCTATGACTTCTGGGGGTACTTTAACTTATGAGGGTCTTTTTGAGATACTTTCACTATCTGGATCGTATATGCTCACCGAGAATGGAGAAACAAAGAGCCGATCTGGCGGAATGAGCGTCTCAGTTGGCCGGGTGGTAGGCGGAGGACTTGCTGGTCTGTTGGTTGCTGCGGGTTCTGTTCAGGTTGTGGTAGGAAGTTTCATGCCAGGTCACCAGCAAGAAAATAAGCCGAAACAGCATCGAATTGACTTTACGACGAATGCAATCTCCCCCCAAATAAATTCCATGAATGGTGACGAACTCAAAGGAATCTATAGTGGCGGAAAGCCGACCGTGACTCCAACTTCTTACGTTGAAGACGACTCAGTTTCTCTGTTTAGAATCTCAGTCAATCGACAACAAATCGTCTTTGCCCGAAGGCGATCCAATCAAACTGTGAAGTTTCAGTGCTGA 984 49.19 MEEKENLGSGFALKGDEAPDGYQVAARSENPNPIVVHTVAAAEPVADAVSPASAAVTATDGKKKRGRPRKYDTNGKVILALSPMPISASIPLTGEYSAWKKGRGKPLESVKKSHKFVFGTPGERIAYSVGANFTPHMITVNPGEDVTMKIMAFSRQGSRAICILTANGTISSVTLRQPMTSGGTLTYEGLFEILSLSGSYMLTENGETKSRSGGMSVSVGRVVGGGLAGLLVAAGSVQVVVGSFMPGHQQENKPKQHRIDFTTNAISPQINSMNGDELKGIYSGGKPTVTPTSYVEDDSVSLFRISVNRQQIVFARRRSNQTVKFQC 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 43984444 43987038 + Bma008503.1 Bma12g01151 92577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g01151 327 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 7 310 - -
Bma12g01151 327 CDD DUF296 134 244 IPR005175 -
Bma12g01151 327 Pfam Plants and Prokaryotes Conserved (PCC) domain 135 244 IPR005175 -
Bma12g01151 327 MobiDBLite consensus disorder prediction 49 70 - -
Bma12g01151 327 Gene3D - 135 262 - -
Bma12g01151 327 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 249 - -
Bma12g01151 327 ProSiteProfiles PPC domain profile profile. 130 265 IPR005175 -
Bma12g01151 327 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 310 IPR039605 GO:0003680
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g01151 Bma-Chr12:43984444 Bma14g00146 Bma-Chr14:2071090 1.00E-48 dispersed
Bma14g00567 Bma-Chr14:6073947 Bma12g01151 Bma-Chr12:43984444 6.16E-83 transposed
Bma12g01151 Bma-Chr12:43984444 Bma05g00817 Bma-Chr5:45468933 5.44E-43 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g01151 - - qsu:112026407 325.865