Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g01165 ATGGGTTCTCGATTCAAGCAATCGATTACTGCAGCCGCCCTTCGATCGTATCTCGCTGAGTTTATCTCAACTTTCTTCTACGTTTTTGCCGTCGTTGGATCCACCATGTCATCTCGGAAGTTGTTTCCGGATGCTTCGTCGGATTCCGCCAGTCTGGCTGTGGTTGCCATTACAAACGCATTTGCGTTGGCCGCAGGCGTTTATATTGCCGCCAGCGTTTCCGGCGGCCAGTTGAATCCGGCAGTCACTTTTGGGATGGCAGTTACCGGCCACATCGCCGTCCCGACCGCTCTTTTCTACTGGTTGGCTCAGATTATGGCCTCCATCACTGCATGTCTTGTGCTTAAAGTTTCCATTGTTGGCCAGCCATTGCCAAGCTATGCAATCAAAGAGGAAATGACAGGGTTTGGAGCCTCCATTTTAGAAGGAATTCTAACCTACATTCTAGTATACACTGTGTTTGTCGCAAGTGACCCCCGGCGAGGCTCTTTTGGGATCGTCGGACCATTAATGATCGGATTTGTAGCCGGAGCCAACGTCTTCTCCGGAGGTCCATTCTCCGGCGGGTCAGTCAATCCAGCTTGTGCCTTGGGGTCGGCTATAGTGACCGGTAGATTTGGAAACCAGGCAGTGTATTGGGTCGGACCCTTGATTGGTGGTGCTATTGCTGGTCTTACATATGATAACGTGACATACCCTAGTAAAGCTTCTAGTTCAGAGGGGGAGATTTCTCAGCAAATTGGGGTTTAA 750 50.4 MGSRFKQSITAAALRSYLAEFISTFFYVFAVVGSTMSSRKLFPDASSDSASLAVVAITNAFALAAGVYIAASVSGGQLNPAVTFGMAVTGHIAVPTALFYWLAQIMASITACLVLKVSIVGQPLPSYAIKEEMTGFGASILEGILTYILVYTVFVASDPRRGSFGIVGPLMIGFVAGANVFSGGPFSGGSVNPACALGSAIVTGRFGNQAVYWVGPLIGGAIAGLTYDNVTYPSKASSSEGEISQQIGV 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 44195489 44196451 + Bma008520.1 Bma12g01165 92591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g01165 249 Gene3D Glycerol uptake facilitator protein. 2 240 IPR023271 -
Bma12g01165 249 PANTHER AQUAPORIN TIP5-1-RELATED 3 242 - -
Bma12g01165 249 PANTHER AQUAPORIN-8 3 242 IPR034294 -
Bma12g01165 249 ProSitePatterns MIP family signature. 77 85 IPR022357 -
Bma12g01165 249 Pfam Major intrinsic protein 11 227 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma12g01165 249 SUPERFAMILY Aquaporin-like 10 235 IPR023271 -
Bma12g01165 249 PRINTS Major intrinsic protein family signature 173 195 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma12g01165 249 PRINTS Major intrinsic protein family signature 15 34 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma12g01165 249 PRINTS Major intrinsic protein family signature 96 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma12g01165 249 PRINTS Major intrinsic protein family signature 141 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma12g01165 249 PRINTS Major intrinsic protein family signature 210 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma12g01165 249 PRINTS Major intrinsic protein family signature 59 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00584 Bma-Chr4:5587666 Bma12g01165 Bma-Chr12:44195489 8.21E-45 dispersed
Bma10g00051 Bma-Chr10:539004 Bma12g01165 Bma-Chr12:44195489 3.62E-53 dispersed
Bma12g01165 Bma-Chr12:44195489 Bma12g00064 Bma-Chr12:1219290 4.41E-27 dispersed
Bma12g01165 Bma-Chr12:44195489 Bma05g00835 Bma-Chr5:45726737 1.43E-24 wgd
Bma12g01165 Bma-Chr12:44195489 Bma08g00367 Bma-Chr8:8023860 5.77E-13 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g01165 K09873 - zju:107414222 332.028