Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00014 TTGGGAGAGGCAGAGATGGGCCAGCCGGGAAACGGGTACGACGAAGGTGTACAGCGGGTGGAAATCCCGGAGGCCAAGCCATTTCTGAAATCTCTGAAGAACGGTCTGAAGGAGACCTTCTTCCCCGATGACCCACTTAAACAGTTCAAGAACCAACCCACGTTGAAAAAGGTCAAGCTTGGGTTTCAGTACTTCTTCCCGGTCCTGGAATGGGCTCCTCGTTATAGCTTTGCTTTCTTGAAAGCAGATGTCATTGCCGGAATCACCATTGCCAGCCTAGCTATTCCGCAGGGAATCAGCTACGCCAAGCTCACTAATCTTCCTCCAATATATGGCCTGTATTCGAGCTTTGTGCCTCCATTGATATATGCGATTATGGGGAGCTCCAGGGATCTGGCCGTCGGGACAGTGGCGGTTGCGTCGCTGCTGATAGCGTCGATGTTGGGAGCGGAGGTTGATGCAAAGAAAAGTCCAGAGCTTTACATCCACCTCGCTTTCACTGCAACCTTCTTCGCCGGAGTATTCCAGGCTGCATTGGGATTATTCAGGCTAGGTTTTGTGGTGGATTTTCTGTCTCATGCTACAATAGTGGGGTTCATGGCTGGATCAGCGGTGGTAGTGAGCCTGCAACAGCTCAAAGGCATTCTGGGCCTCGACCATTTCACTCACCACTCTGACATCGTCTCTGTTATGCGTTCTGTTTTCACCCAAACCCACCAGTGGAAATGGCAGAGTGGAGTTATAGGATGCGTCTTCCTTATTTTCCTCGTCAGCACCAGATTATTCAGCAAGAGACGGCCAAAATACTTTTGGTTAGCAGCCATGGCACCTCTAATGTCAGTCATTTTGGCGAGTCTTTTTGTTTTCGTCACCCATGCTGAGAAACATGGAGTTCAAGTGATAGGAACGCTGAAGAAGGGTTTAAATCCCATATCAGTTACAGATCTCATATTTGCGCCTCCTTATTTGTCTCTTGCTGTAAAAACCGGCATCGTCACCGGCATCGTAGCTCTCGCCGAAGGAATAGCAGTTGGGAGAAGCTTTGCCATGTTCAAGCACTACAATATTGATGGAAACAAAGAGATGGTTGCAATTGGGACCATGAACATTGTTGGCTCTTGCACTTCTTGCTATCTTTCTACAGGGCCGTTTTCCCGCTCTGCCGTGAACTACAACGCAGGATGCAAAACGGCAGCATCGAACATTGTGATGGCAATTGCAGTTATGTTTACGTTGTTGTTCTTGACACCCTTGTTCCACTACACCCCCCTCGTGGTCCTCTCTTCTATTATCATGTCCGCCATGCTCGGCCTCATCGACTACGAAGCTGCCGTTCATCTCTGGAAGGTCGATAAATTCGATTTTGTAATCTGTATAAGCGCATTTGCCGGCGTGGTCTTTGCCAGTGTGGAAATTGGCCTCGTCATAGCTGTTGCTATATCGGTGCTAAGAGTGCTTCTACTGATAGCAAGGCCGAGGACCTTTGCTCTGGGAAACATTCCAAATTCTACGAATTACAGAAACATGGAACAATATCCAAGAGCAAATAGTGTTCCTGGCATTCTCATACTGGAAATCAATTCTCCCCTTTATTTCGCCAATTCCAATTACTTGAGAGAAAGGATTGTAAGATGGATTGATGATGAAGAAGACCGCATAAATGCTTCTGGGAACACTAGTCTGCAGTATGTTATTTTGGATATGAGTGCGGTTAGCAACATCGATACGAGCGGAATAGGCATGCTCCAAGAGGTGAAGAAGATTCTTGACAGAAGGGGATTAAAGCTCGTGCTGACTAACCCTGGTGGCGAGGCCATGAAGAAGCTCAACAAGGCCAGGTTCGTCGAGAGTGTGGGGGGAGAATGGATCTTTCTTACCATCGGCGATGCCGTCAGTGCCTGTAATTACATGCTCCAAAAATGCGAAACAGAATCTGGTAAAGACAAGGCAGAGGTGTGGAACAGCGTCTAA 1971 47.89 LGEAEMGQPGNGYDEGVQRVEIPEAKPFLKSLKNGLKETFFPDDPLKQFKNQPTLKKVKLGFQYFFPVLEWAPRYSFAFLKADVIAGITIASLAIPQGISYAKLTNLPPIYGLYSSFVPPLIYAIMGSSRDLAVGTVAVASLLIASMLGAEVDAKKSPELYIHLAFTATFFAGVFQAALGLFRLGFVVDFLSHATIVGFMAGSAVVVSLQQLKGILGLDHFTHHSDIVSVMRSVFTQTHQWKWQSGVIGCVFLIFLVSTRLFSKRRPKYFWLAAMAPLMSVILASLFVFVTHAEKHGVQVIGTLKKGLNPISVTDLIFAPPYLSLAVKTGIVTGIVALAEGIAVGRSFAMFKHYNIDGNKEMVAIGTMNIVGSCTSCYLSTGPFSRSAVNYNAGCKTAASNIVMAIAVMFTLLFLTPLFHYTPLVVLSSIIMSAMLGLIDYEAAVHLWKVDKFDFVICISAFAGVVFASVEIGLVIAVAISVLRVLLLIARPRTFALGNIPNSTNYRNMEQYPRANSVPGILILEINSPLYFANSNYLRERIVRWIDDEEDRINASGNTSLQYVILDMSAVSNIDTSGIGMLQEVKKILDRRGLKLVLTNPGGEAMKKLNKARFVESVGGEWIFLTIGDAVSACNYMLQKCETESGKDKAEVWNSV 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 285982 289254 + Bma008702.1 Bma13g00014 92743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00014 656 Pfam Sulfate permease family 80 460 IPR011547 GO:0016021
Bma13g00014 656 ProSiteProfiles STAS domain profile. 511 634 IPR002645 -
Bma13g00014 656 TIGRFAM sulP: sulfate permease 67 630 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma13g00014 656 PANTHER SULFATE TRANSPORTER 11 651 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma13g00014 656 PANTHER SULFATE TRANSPORTER 3.1 11 651 IPR030311 GO:0008272|GO:0009507|GO:0015116
Bma13g00014 656 Pfam STAS domain 512 630 IPR002645 -
Bma13g00014 656 Gene3D STAS domain 491 637 IPR036513 -
Bma13g00014 656 SUPERFAMILY SpoIIaa-like 516 634 IPR036513 -
Bma13g00014 656 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
Bma13g00014 656 CDD STAS_SulP_like_sulfate_transporter 512 627 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02625 Bma-Chr1:83812419 Bma13g00014 Bma-Chr13:285982 0 dispersed
Bma13g00014 Bma-Chr13:285982 Bma15g00623 Bma-Chr15:7974865 0 dispersed
Bma13g00014 Bma-Chr13:285982 Bma01g01775 Bma-Chr1:60482558 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00014 K17471 - jre:109018587 1020.38