Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00046 ATGGAGAATCATATCGACGACCACGAATCAATAGAAAGCTCTTTAGAAGAAAGCAGAGAAGAAGAGAAAGATCAAGAGCTTCAAGAGAAGAAACTTCCAGTCCAGAGATTGAAACGATACGACTCTTTGGATTACGAATCTAACACTCTTCCAGGCGTGCATGGCCGCTCCTCCGAGGCGGTGGCCTGGTCGGTGATATTGCATCTAGCATTCCAGAGCATCGGAATAGTGTACGGAGACATCGGAACGTCGCCGCTTTACGTGTATGCGAGCACTTTTCCGAACGGCATCAAGAATAACGATGATATTTTGGGTGTTCAGTCTCTGATATTCTACACTCTCACTTTGATCCCTCTCGTTAAATACGTCTTGATCGTGCTAAAAGCCAACGACAATGGCGACGGAGGAACTTTTGCTCTCTACTCGTTGTTGTGTCGATACGCGAAAATCAGCTTGCTACCGAGTCAGCAAGCGGAAGACCAAGACGTGTCGAATTTCAAGCTCGACCTCCCGAGTAACCGCCTTCGGAGGGCATCGAAGCTCAAAACGATGCTCGAGAACAGCCCTGCTGCAAAGTCCGTCCTCTTGTTCGCAACAATGCTCGGCACGTCGATGGTGATTGGAGACGGGGTCCTCACGCCTTCCATTTCTGTTTTGTCGGCTGTAGGAGGAATCAAAGAAGCCAAACCTAATGTGACACAAGATACAATAGTTTGGATTTCAGCAGCCATCTTGGTACTTCTGTTCATGGTTCAGAGATTTGGAACAGACAAAGTTGGCTACACTTTTGCTCCCATCATTTGCATATGGTTTGCCTTCATAGCAGGAGTCGGCATCTTCAATTTCATCAAGTTCGACCCTTTGGTGGTTAAAGCCGTCAATCCGAAATACATCATCGATTATTTCAGGAGAAACAAGAAGGATGCGTGGATTTCCCTTGGCGGCATCGTGCTTGCCATCACGGGGACCGAGGCCCTGTTTGCTGATGTTGGTCACTTCACAGTGAGGTCTATTCAAATAAGTATGTGCTGCGTGACCTATCCGGCGCTCATTTGTGCATACTTCGGACAAGCCTCTTACCTTCGCAAGCACAATGATGACGTTCTCAACACCTTCTTCAAGTCCATTCCAGATCCAATGTATTGGCCGGTGTTTGTGGTGTCTATATTGGCGTCGATCATAGCAAGTCAAGCGATGATTTCCGGGACATTCTCTATAATTCAACAATCCTTGTCTCTCGGGTGTTTCCCTCGAGTGAAAGTTGTACACACCTCGGCCAAGTATCATGGTCAAGTTTACATTCCCGAAGTCAATTATCTTCTCATGCTTGCTTGTTTAGGCGTTACATTAGGTTTCAAGGAGACCACGAGAATTGGCAACGCTTATGGAATTGCAGTGGTGTTTGTGATGACACTAACATCCTCCTTCCTAGTTCTTATAATGATAATAATATGGAAGACTTCGATTATTCTCGTCATCTTCTATGTCCTCGTAATTGGTTCGATGGAGCTTCTCTATCTTAGCTCCGTGCTCTATAAGTTTGCCGATGGCGGATATCTTCCTCTTGCCTTTGCATTTGTTCTAATGATGATAATGTATGTATGGAACGATGTTTATCGGAGAAAATACAAATACGAGCTTGAACACAAGATTTCTCCTCAGAAGCTCAATGACATTGCTTCAAACTCCAGCCTGTTTAGAGTGGATGGCCTTGCCATATTTTACTCGGGGCTCGTTCAAGGGATCCCTCCAATTTTCAAGCATTATGTTGATAATGTGCCGGCCTTGCATGCGATTATGGTTTTCGTGTCTGTAAAGTCGTTGCCCATCGGAAAAGTACCAGCCGAAGAGCGTTTCCTATTCCGCAGAGTCAAGCCAAAACAACTTAACGTGTATCGATGCGTCGTGAGATATGGTTATAACGATGATAGAAATGAAGCCAAACCGTTTGAGATAATGTTGGTGGAAAAGTTGAAGGAGTTCATTACTACCGAGTTTTGGATAGAAAAAGCTCCTACCGACGACAAGTTATCAAAAAACAGCTCAATGAGGCAAGATGAGGGAGAGAATGAGTTAATTGAAGAGATAGAGGAAGTGAACAAGGCATGGAAAGGTGGAGTCGTGCATTTGATCGGAGAGAATGAGATTGTGGCAGGCAAAGGATCCGGGATTGGGAAGAGGATTCTCATCGACTATGGTTATAATTTCTTGAAGAAAAATATAAGGCAAAGCGAAGAGCTTTTTGACATTCCTCACAAACGTATGCTTAAAGTAGGCATGACCTATGAACTTTGA 2295 44.71 MENHIDDHESIESSLEESREEEKDQELQEKKLPVQRLKRYDSLDYESNTLPGVHGRSSEAVAWSVILHLAFQSIGIVYGDIGTSPLYVYASTFPNGIKNNDDILGVQSLIFYTLTLIPLVKYVLIVLKANDNGDGGTFALYSLLCRYAKISLLPSQQAEDQDVSNFKLDLPSNRLRRASKLKTMLENSPAAKSVLLFATMLGTSMVIGDGVLTPSISVLSAVGGIKEAKPNVTQDTIVWISAAILVLLFMVQRFGTDKVGYTFAPIICIWFAFIAGVGIFNFIKFDPLVVKAVNPKYIIDYFRRNKKDAWISLGGIVLAITGTEALFADVGHFTVRSIQISMCCVTYPALICAYFGQASYLRKHNDDVLNTFFKSIPDPMYWPVFVVSILASIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSAKYHGQVYIPEVNYLLMLACLGVTLGFKETTRIGNAYGIAVVFVMTLTSSFLVLIMIIIWKTSIILVIFYVLVIGSMELLYLSSVLYKFADGGYLPLAFAFVLMMIMYVWNDVYRRKYKYELEHKISPQKLNDIASNSSLFRVDGLAIFYSGLVQGIPPIFKHYVDNVPALHAIMVFVSVKSLPIGKVPAEERFLFRRVKPKQLNVYRCVVRYGYNDDRNEAKPFEIMLVEKLKEFITTEFWIEKAPTDDKLSKNSSMRQDEGENELIEEIEEVNKAWKGGVVHLIGENEIVAGKGSGIGKRILIDYGYNFLKKNIRQSEELFDIPHKRMLKVGMTYEL 764
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 543463 546785 - Bma008739.1 Bma13g00046 92775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00046 764 Coils Coil 1 28 - -
Bma13g00046 764 MobiDBLite consensus disorder prediction 1 30 - -
Bma13g00046 764 TIGRFAM kup: potassium uptake protein 69 763 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bma13g00046 764 Pfam K+ potassium transporter 70 642 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bma13g00046 764 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 24 763 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bma13g00046 764 PANTHER POTASSIUM TRANSPORTER 24 763 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00889 Bma-Chr2:47644294 Bma13g00046 Bma-Chr13:543463 0 dispersed
Bma02g00892 Bma-Chr2:47685656 Bma13g00046 Bma-Chr13:543463 0 dispersed
Bma02g01216 Bma-Chr2:54237310 Bma13g00046 Bma-Chr13:543463 0 dispersed
Bma06g00624 Bma-Chr6:33376378 Bma13g00046 Bma-Chr13:543463 0 dispersed
Bma13g00046 Bma-Chr13:543463 Bma01g01233 Bma-Chr1:15528790 0 dispersed
Bma13g00046 Bma-Chr13:543463 Bma13g00047 Bma-Chr13:553761 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00046 K03549 - jre:108997954 1108.98