Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00047 ATGGAGAATCCTATTATTGACGACCACGAATCAATAGAAAGCTCTTTAGAAGAAAGCAGAGAAGAAGAGAAAGATCAAGAGCTTCAAGAGAAGAAAATTCCAGTCCATATATTGCAACGATACGACTCTTTGGATTACGAATCTAACTCTCTTCCAGGCGCGCATGGCCGCTCCTCCGAGGCGGTGGCCTGGTCGGTGATACTTCATCTAGCATTCCAGAGCATCGGAATAGTGTACGGAGACATCGGAACGTCACCGCTTTACGTGTATGCGAGCACTTTTCCGAACGGCATCAAGGATAACGATGATATTTTGGGTGTTCAGTCTCTGATATTCTACACTCTCACTTTGATCCCTCTCGTTAAATACGTCTTGATCGCGCTAAAAGCCAACGACAATGGCGACGGAGGAACTTTTGCTCTCTACTCGATGTTGTGTCGACACGCCAAAATCGGTTTGCTACCGAGTCAGCAAGCGGAAGACCAAGACGTGTCGAATTTCAAGTTCGACCCCCCGAGTAACCGCCTTCGAAGGGCATCGAAGCTCAAAACGAAGCTCGAGAACAGCCCTTTTGCAAAGTCCGTCCTCTTGTCCGCAACAATGCTCGGCATGTCGATGGTGATTGGAGAGGGCGTCATCACGCCTTCCATTTTTGTTTTGTCGACTGTGGTTGGAATCAGAGAAGCCAATCCTCATGTGACACAAGGTACGATAGCTTGGATATCAGCAGCCATCTTGGTTCTCCTGTTCATGGTTCAGAGATTTGGAACAGACAAAGTTGGCTACATTTTTTCTCCCATCATTTGCATATGGTTTGCCCTCATAGCAGGAGTAGGCATCTTCAATTTCTTCATGTTCGACCCTTTGGTGGTTAAAGCTGTCAATCCGAAATACATCATCGATTATTTCAGGAGAAACAAGAAGGATGCATGGATTTCCCTTGGCGGCATCGTGCTTGCCATCACGGGGACCGAGGCCCTGTTTGCTGATGTTGGTCACTTCACAGTGAGGGCTATTCAAATAAGTATGTGCTGCGTGACCTATCCGGCGCTCATTTGTGCATACTTCGGACAAGCCTCTTACCTTCGCAAGCACAACGATGACGTTCTCGATACCTTCTTCAAGTCCATTCCAGATCCGATGTATTGGCCGGTGTTTGTAGTGTCTATATTGGCGTCGATCATAGCAAGTCAATCGATGATTTCCGGGACATTCTCTATAATTCAACAATCCTTGGCACTCGGGTGTTTCCCTCGAGTGAAAGTTGTACACACCTCGGCCAAGTATCATGATCAAGTTTACATTCCCGAAGTCAATTATCTTCTCATGCTTGCTTGTTTAGGTGTTACATTAGGTTTCAAGGAGGCCGAGAGAATCAGCAATGCTTATGGAATTGCAGTGGTGTTTGTGATGACACTAACATTCTCCTTCCTAGTTCTTATAATGATAATGATATGGAAGACTCCGATTATTCTCGTCACCTTCTATGTCCTCGTAATTGGTTCGATGGAGCTTCTCTATCTCAGCTCCGTCCTCTATAAGTTTGCCGATGGCGGATATCTTCCTCTCGCCTTTGCATTTATTCTAATGATGATAATGTATGTATGGAACGATGTTTATCGGAGAAAATATAAATACGAGCTTGAACACAAGATTTCACCTCAGAAGCTCAATGACATTGCTTCAAACTCCAACCTGTTTAGAGTGGATGGCCTTGCCATTTTTTACTCAGGGCTCGTTCAAGGGATCCCTCCAATTTTCAAGCATTATGTTGATAATGTGCCGGCCTTGCATGCGATTATGGTTTTTGTGTCTATAAAGTCGTTGCCCATTGGAAAAGTACCAGTTGAAGAGCGTTTCCTATTCTGCAGAGTCAAGCCAAAACAGTTTAACGTGTATCGATGCATCGTGAGATATGGTTATAACGATGATAGAAATGAAGCCGAACCATTTGAGATAATGTTGGTGGAAAAGTTGAAGGAGTTCATTACTACTGAGTTTTGGATAGCAAAAGCTCCAACCGACGACAAGTTATCAAAAAACTACTCAATAAGGCAAGATGAGGGAGAGAATGAGTTAATTGAAGAGATAGAGGAAGTGAACAAGGCATGGAAAAGTGGAGTTGTGCATTTGATCGAAGAGAATGAGATTGTGGCAGGCAAAGGATCCGGGATTGGGAAGAGGATCCTCATCGACTATGGTTATAATTTCTTGAAGAAAAATACAAGGCAAAGCGAAGAGCTTTTTGACATTCCTCACAATCGTATGCTTAAAGTAGGCATGACCTATGAACTTTGA 2298 44.08 MENPIIDDHESIESSLEESREEEKDQELQEKKIPVHILQRYDSLDYESNSLPGAHGRSSEAVAWSVILHLAFQSIGIVYGDIGTSPLYVYASTFPNGIKDNDDILGVQSLIFYTLTLIPLVKYVLIALKANDNGDGGTFALYSMLCRHAKIGLLPSQQAEDQDVSNFKFDPPSNRLRRASKLKTKLENSPFAKSVLLSATMLGMSMVIGEGVITPSIFVLSTVVGIREANPHVTQGTIAWISAAILVLLFMVQRFGTDKVGYIFSPIICIWFALIAGVGIFNFFMFDPLVVKAVNPKYIIDYFRRNKKDAWISLGGIVLAITGTEALFADVGHFTVRAIQISMCCVTYPALICAYFGQASYLRKHNDDVLDTFFKSIPDPMYWPVFVVSILASIIASQSMISGTFSIIQQSLALGCFPRVKVVHTSAKYHDQVYIPEVNYLLMLACLGVTLGFKEAERISNAYGIAVVFVMTLTFSFLVLIMIMIWKTPIILVTFYVLVIGSMELLYLSSVLYKFADGGYLPLAFAFILMMIMYVWNDVYRRKYKYELEHKISPQKLNDIASNSNLFRVDGLAIFYSGLVQGIPPIFKHYVDNVPALHAIMVFVSIKSLPIGKVPVEERFLFCRVKPKQFNVYRCIVRYGYNDDRNEAEPFEIMLVEKLKEFITTEFWIAKAPTDDKLSKNYSIRQDEGENELIEEIEEVNKAWKSGVVHLIEENEIVAGKGSGIGKRILIDYGYNFLKKNTRQSEELFDIPHNRMLKVGMTYEL 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 553761 557211 - Bma008740.1 Bma13g00047 92776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00047 765 Pfam K+ potassium transporter 71 643 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bma13g00047 765 TIGRFAM kup: potassium uptake protein 70 764 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bma13g00047 765 Coils Coil 6 29 - -
Bma13g00047 765 PANTHER POTASSIUM TRANSPORTER 25 764 - -
Bma13g00047 765 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 25 764 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bma13g00047 765 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00047 Bma-Chr13:553761 Bma01g01233 Bma-Chr1:15528790 0 dispersed
Bma13g00046 Bma-Chr13:543463 Bma13g00047 Bma-Chr13:553761 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00047 K03549 - jre:108997954 1057.36