Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00073 ATGGTCGCCGACGCTCACGGCCTTAGCCCCAAGGGTCTTCTTTGCCATGCTGGTGCTGGTGCTGCAGCTGGAGTCATTGCTGCTACTTTTGTGTGTCCTTTAGATGTAATAAAGACTCGGTTTCAGGTTCATGGACTGCCAAAGATTGGTAATGGAAGTGTTAAAGGCAGTCTTATAGTTGGCAGCTTGGAACAAATATTCCAGAAGGAGGGGCTACGTGGAATGTACCGTGGGCTCTCGCCCACTGTTCTAGCATTACTTCCTAATTGGGCAGTTTACTTTACAATGTATGAGCAACTCAAAAGTTTACTTGGCTATGATGATGATCATCACCTTTCAGTTGGTGCTAACATGATAGCCGCTTCTGGTGCTGGAGCTGCAACAACTATTGCCACAAATCCTCTCTGGGTTGTGAAGACAAGACTTCAAACGCAAGGAATGAGGCCAGGGGTGGTGCCTTATCAGAATACACTATCTGCTTTGAGGAGAATAGCTCTGGAGGAAGGCATTCGTGGATTATACAGTGGTCTTGTTCCTGCTTTAGCTGGTGTTAGTCATGTTGCAATCCAGTTTCCTACATATGAGAAGATAAAAGAATACTTGGCCAGTAGAAGTAACACTACTACGGATAAACTGACTGCCCAAGATGTTGCTGTTGCCTCATCAGTCTCCAAAATATTTGCTTCCACTTTGACATATCCTCATGAGGTAGTACGAGCAAGGCTCCAAGAGCAAGGGCACCATTCTGAGAAACGATATGCCGGGGTAACAGATTGCATTAAAAAAGTATTTCAGCAAGAAGGCGTCCCTGGATTTTATCGTGGGTGTGCCACCAACCTACTCAGGACAACTCCTGCAGCCGTAATCACATTTACGAGCTTCGAGATGATCCACCGATTTCTCATGACTCTATTTCTTCCAGATCCACGCTCTCATGCACTATGA 945 45.82 MVADAHGLSPKGLLCHAGAGAAAGVIAATFVCPLDVIKTRFQVHGLPKIGNGSVKGSLIVGSLEQIFQKEGLRGMYRGLSPTVLALLPNWAVYFTMYEQLKSLLGYDDDHHLSVGANMIAASGAGAATTIATNPLWVVKTRLQTQGMRPGVVPYQNTLSALRRIALEEGIRGLYSGLVPALAGVSHVAIQFPTYEKIKEYLASRSNTTTDKLTAQDVAVASSVSKIFASTLTYPHEVVRARLQEQGHHSEKRYAGVTDCIKKVFQQEGVPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLMTLFLPDPRSHAL 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 844469 849119 + Bma008765.1 Bma13g00073 92802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00073 314 PRINTS Mitochondrial carrier protein signature 221 243 IPR002067 GO:0055085
Bma13g00073 314 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Bma13g00073 314 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Bma13g00073 314 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085
Bma13g00073 314 PRINTS Mitochondrial carrier protein signature 127 145 IPR002067 GO:0055085
Bma13g00073 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 103 IPR018108 -
Bma13g00073 314 SUPERFAMILY Mitochondrial carrier 12 296 IPR023395 -
Bma13g00073 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
Bma13g00073 314 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 313 IPR044712 GO:0006862|GO:0055085
Bma13g00073 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 300 IPR018108 -
Bma13g00073 314 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 1 313 - -
Bma13g00073 314 Pfam Mitochondrial carrier protein 111 203 IPR018108 -
Bma13g00073 314 Pfam Mitochondrial carrier protein 12 105 IPR018108 -
Bma13g00073 314 Pfam Mitochondrial carrier protein 215 303 IPR018108 -
Bma13g00073 314 Gene3D Mitochondrial carrier domain 3 107 IPR023395 -
Bma13g00073 314 Gene3D Mitochondrial carrier domain 108 304 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00073 Bma-Chr13:844469 Bma06g00445 Bma-Chr6:16987721 3.23E-08 dispersed
Bma14g01655 Bma-Chr14:35157701 Bma13g00073 Bma-Chr13:844469 3.04E-23 dispersed
Bma13g00073 Bma-Chr13:844469 Bma06g01108 Bma-Chr6:47864999 1.90E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00073 K15115 - zju:107426265 530.406