Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00082 ATGGCATCAGTGGGAAACCAAACTGTAGAAAGTGTTACACCGGTTTCCAGCATTATTGGGAGTACAAAATGTGAAAGCTACTTGATTTTTAGGGCCGAAACTTCCCTAAGCGATCCAATACGATCAGTCTTGTACTTTCTTGGGCTTGCTTATTGTTTTATTGGATTGTCAGCTATAACTTCCCGATTTTTCCGTTCCATGGAGAATGTCGTGAAGCACTCTCGGAAAGTGGTGAAAGTAGATCCTTTGACCAAAGCTGAAACTGTTCAATATGAAAAGGTGTGGAATTTCACAATTGCAGATATTAGTCTCCTTGCATTTGGCACCAGCTTTCCTCAAATATCATTAGCTACTATTGATGCTCTCCGAAACATAGGGAAGCTTTATGCTGGAGGTTTGGGTCCTGGAACACTTGTTGGTTCGGCTGCATTTGACCTTTTCCCCATTCATGCTGTTTGTGTTGTTGTGCCAAAAGCTGGGGAATTGAAAAAGATAGCGGACTTAGGCGTGTGGACTCCAAATGTGATTACTGTCTGGGAAGCTTTGATTACAGTGGTGCAATATGGATTACTGTTGACACATGCTTATGCTCAGGACAAGCGTTGGCCATACATCTCTCTCCCTCTTGCAAGAATTGAGAGGCCAGAGGATTGGGTGCCTGCAGAGATTCCTAAATACAAACAATATGATGTATATGATGGGGCAGATGATGAAAGAGTAGATGAAGAAGAAAATGGAAGGATTGTTGACATTTTCTCTGTCCACTCAACAAATGTTGGAGATCCAGCATATCAGGAAGTTCCCATAACTGATTACGGTGCTGAATCTTCAGATATGATTGTTGACAGGGAGAACGATTTAGAAGATACTCGTGTTCTTATAGTTTGGAAGCAACAGTTTGTAGATGCACTCAAGGCAATATTTTTTATCATTGCAGACTCTGCAAAAATGAGCATTTATCAACGAGTGGGAAGAACTTGTTGGAAGTTACTTCTTCTTCCTTGGAAATTTTTCTTTGCTTTTGTTCCTCCTTATCATATTGGTCATGGATGGCTGGCCTTCATTTGCTCGCTGATTTTCATAAGCGGGATCGCTTACATTGTTACTCAGCTCACCGATCTTATTAGCTGTGTCACAGGACTTAATCCTTATGTAATAGCATTTACAGCATTGGCTGCTGGAACTTCCTGGCCAGACTTGGTTGCTAGTAAGATTGCTGCTGAACGTCAAACAATAGCAGATTCAGCCATTGCAAACATCACTTGCAGCAACTCAGTTAACATATACGTGGGTATTGGATTTCCATGGTTGATCGACACTGCATACAATTACATCGCGTATGGAGAACCTCTACGGATCGAAAACGCAGCAGGTCTCAGCTTCTCGTTAGTAATCTTCTTCATTACTTCTGTAGGTTGTATTGGTGTACTAGTTTTAAGACGCATCACGTTAGGCGCAGAGCTTGGAGGTCCCAAGCCATGGGCGTGGATGACCTGCATTTATTTTATGCTGCTCTGGCTTATTTTTGTAGTGCTATCTTCTCTTAAAGTCTCAGGGGTCATATAG 1566 41.95 MASVGNQTVESVTPVSSIIGSTKCESYLIFRAETSLSDPIRSVLYFLGLAYCFIGLSAITSRFFRSMENVVKHSRKVVKVDPLTKAETVQYEKVWNFTIADISLLAFGTSFPQISLATIDALRNIGKLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKIADLGVWTPNVITVWEALITVVQYGLLLTHAYAQDKRWPYISLPLARIERPEDWVPAEIPKYKQYDVYDGADDERVDEEENGRIVDIFSVHSTNVGDPAYQEVPITDYGAESSDMIVDRENDLEDTRVLIVWKQQFVDALKAIFFIIADSAKMSIYQRVGRTCWKLLLLPWKFFFAFVPPYHIGHGWLAFICSLIFISGIAYIVTQLTDLISCVTGLNPYVIAFTALAAGTSWPDLVASKIAAERQTIADSAIANITCSNSVNIYVGIGFPWLIDTAYNYIAYGEPLRIENAAGLSFSLVIFFITSVGCIGVLVLRRITLGAELGGPKPWAWMTCIYFMLLWLIFVVLSSLKVSGVI 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 907548 910603 - Bma008774.1 Bma13g00082 92811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00082 521 PANTHER SODIUM/CALCIUM EXCHANGER 261 521 - -
Bma13g00082 521 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 14 202 - -
Bma13g00082 521 Pfam Sodium/calcium exchanger protein 349 513 IPR004837 GO:0016021|GO:0055085
Bma13g00082 521 Pfam Sodium/calcium exchanger protein 45 196 IPR004837 GO:0016021|GO:0055085
Bma13g00082 521 PANTHER SODIUM/CALCIUM EXCHANGER 14 202 - -
Bma13g00082 521 Gene3D - 98 212 IPR044880 -
Bma13g00082 521 Gene3D - 301 515 IPR044880 -
Bma13g00082 521 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 261 521 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00082 K03452 - pvy:116119828 737.643