Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00120 ATGATTTTTCTCTCTCACACTCATCCAAACTCCATGATCATCCCCTCCAACTCCTCCTCCGGCCACCCTTTTTCTGAGAGAGCCACTCCCCGGCTTATCTTCTCCGTCTTCGATGTCAGCCTCCTCGAGCTCTTACTTGCGGTTTTTGTGTTCGTGGCTATCAAGTCGATGAGGAAGAAGAGACGACACGGCCTGACTGTATGGCCGATCGTCGGGATGTTACCGTCGTTGATGGTCGGAATTCAGACCAACTTGTACGAATGGATCACCGGCGTTCTTTGCCGCCAAAACGGAACTTTTGTGTTTAAAGGACCATCGTTTAGCAGCCTGAACTGTGTCGTCACCTCCGATCCTCTAAACGTCGAGCATATTCTCAAAACAAGGTTCACCAAATATCCTAAAGGGCCGTTTTTTGTGGATACCGTTCAGGATCTTCTCGGCGACGGAATATTTAACGCTGACGACGAGAAGTGGCGGCGACAGAGGAAGACGGCGAGCATCGAGTTCCATTCCAGTAAGTTTCGTAAATTAACGGTTGACTCGTTGTTTGACCTCGTCCATTCTCGGCTACTACCGGTACTGGAGGATTCAGTTGTGAACTCCGCCGTAATTGACCTCCAAGACGTTCTTCTCCGGCTAACCTTCGATAACGTCTGCATGATTGCTTTCGGGGTAGACCCCGGTTGTCTCCGGCTAGGCTTGCCGGAAATTCCATTCGCTAAAGCCTTCGAGGATGCGACCGAAGTAACCGTCTTACGCTTCGTCACACCAACTTTTCTATGGAAAACGATGAGATACTTCAATGTGGGAATGGAGAAGAAGCTTAGAATCTCCATCGAAGCTGTGAACAAATTCGCAGAAAACGTTATTCAGACGAGGAAGAAGGAGCTCTCTCTGGAGAAGGGAGAAGAAACGGAAAGATCAGACATTCTGACAGTGTTCATGGGTCTGAAAGACGAGAGTGGGGAGCCATTTTCAGACAAGTTCTTGAGGGATATTTGCGTGAATTTCATACTCGCCGGAAGAGATACGTCGTCGGTGGCGCTAAGCTGGTTTTTCTGGCTGGTGGACAAGAACCCGGCGGTGGAAGAGAAAATACTTGCAGAGATAAGGAGAATAGTGGGAGAGAGGGAAGAAAAAGAGAGCTGTGCGGTGTTTAAGGCAGAGGAAATAAAGAAGATGGAGTATTTGCTGGCTGCTCTTTCTGAAGCTCTCAGATTGTATCCCTCTGTTCCTGTTGATCACAAAGAGGTCATTGAAGACGATGAATTTCCAGACGGAACAGTTCTAAAGAAAGGAACAAAGGTAATTTATGCTATCTACTCGATGGGAAGAATGGAATCGATATGGGGAAAAGATTGTAGAGAATACAAACCCGAAAGGTGGCTGAGAGACGGGAGGTTCACGGGCGAGTCGGCCTACAAGTTCACGGCCTTCAATGGCGGCCCGAGGCTGTGCTTAGGCAAAGACTTTGCCATCTACCAGATGAAATATGCAGCAGCCTCCATCATCTACCGCTTCCATGTGAAGGTGGTAGAAGGTCACCCTGTTTTGCCAAAGCTTGCATTGACAATGTATATGAAGCATGGTTTGAAGGTAAAGCTTTACAGGAGAGAATAG 1620 48.02 MIFLSHTHPNSMIIPSNSSSGHPFSERATPRLIFSVFDVSLLELLLAVFVFVAIKSMRKKRRHGLTVWPIVGMLPSLMVGIQTNLYEWITGVLCRQNGTFVFKGPSFSSLNCVVTSDPLNVEHILKTRFTKYPKGPFFVDTVQDLLGDGIFNADDEKWRRQRKTASIEFHSSKFRKLTVDSLFDLVHSRLLPVLEDSVVNSAVIDLQDVLLRLTFDNVCMIAFGVDPGCLRLGLPEIPFAKAFEDATEVTVLRFVTPTFLWKTMRYFNVGMEKKLRISIEAVNKFAENVIQTRKKELSLEKGEETERSDILTVFMGLKDESGEPFSDKFLRDICVNFILAGRDTSSVALSWFFWLVDKNPAVEEKILAEIRRIVGEREEKESCAVFKAEEIKKMEYLLAALSEALRLYPSVPVDHKEVIEDDEFPDGTVLKKGTKVIYAIYSMGRMESIWGKDCREYKPERWLRDGRFTGESAYKFTAFNGGPRLCLGKDFAIYQMKYAAASIIYRFHVKVVEGHPVLPKLALTMYMKHGLKVKLYRRE 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1236337 1238395 - Bma008813.3 Bma13g00120 92849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00120 539 SUPERFAMILY Cytochrome P450 64 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00120 539 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00120 539 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00120 539 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00120 539 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00120 539 Gene3D Cytochrome P450 48 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00120 539 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00120 539 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00120 539 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00120 539 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00120 539 PRINTS E-class P450 group I signature 398 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00120 539 PANTHER CYTOCHROME P450 29 537 - -
Bma13g00120 539 PANTHER CYTOCHROME P450 86B1-LIKE 29 537 - -
Bma13g00120 539 Pfam Cytochrome P450 68 528 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00120 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00106 Bma-Chr1:1110007 Bma13g00120 Bma-Chr13:1236337 1.64E-23 dispersed
Bma07g01449 Bma-Chr7:50225439 Bma13g00120 Bma-Chr13:1236337 1.09E-113 dispersed
Bma13g00120 Bma-Chr13:1236337 Bma14g00540 Bma-Chr14:5880231 1.58E-138 dispersed
Bma13g00864 Bma-Chr13:37383609 Bma13g00120 Bma-Chr13:1236337 5.84E-112 dispersed
Bma14g02106 Bma-Chr14:44569312 Bma13g00120 Bma-Chr13:1236337 2.99E-98 dispersed
Bma13g00120 Bma-Chr13:1236337 Bma09g00314 Bma-Chr9:26706233 1.53E-118 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00120 K15402 - vvi:100254406 817.764