Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00137 ATGGTTGATCAGTCGCCATGCCCAACTATTGTTCAGAAGGTGGCTGGCCAGCTCAACCTTCCTTCTCTCACCCCATATCATCAGGGTTGTGAGCGTGTTTTCCAGAGACCTGCTATTTATCAAAGGCTTGCGACTTTTGAAAATTACTCAAGCCCTGCAATGGCACTCTCATGCAGAATCCCAACTGATGTTTCAAGTGTTGCAGTAACTTCCTCTGCCATATTCGTCCCAGCACCTGCAGAGAAAAGCAACTTTCTCATTGACTTCCTTATGGGTGGAGTCTCTGGTGCGGTATCTAAGACAGCTGCTGCTCCACTTGAGCGTATGAAGCTTTTAATTCAAAATCAAGACGAGTTGATCAGGTCTGGCAGGCTCTCTGAACCCTACAAGGGCATTGGTGATTGTCTCCGCCGAACAATCAAAGACGAGGGTGTGGTTGCACTATGGAGGAGTAATACTGTTAATGTCATGCGCTACTTCCCCACTCAGGCGAGTCATATCTTTTGGGCTCTGAACTTTGCATTCAAGGACCACTTTAAGAGCCTTTTCAACTTTAAGAAAGAAAGAGATGGATATTGGAAATGGTTTGCTGGCAACTTGGCTTCAGGTGGTGCAGCTGGTGCTTCGTCCCTTTTCTTTGTCTATTCCCTTGACTATGCTCGAACCCGATTGGCCAACGACGCCAAGGCTGCAAAGAAGGGAGGTGAAAGACAATTCAATGGCGTGATTGATGTGTACAGGAAGACATTACAATCTGATGGCGTTGCTGGGCTCTACCGGGGATTCAACATTTCATGCGCTGGTATCATTATCTATCGAGGTCTTTACTTTGGAATGTATGATTCTCTCAAGCCTGTCTTGTTGACTGGAAAGTTGCAGGATAGCTTTTTTGCGAGCTTTGCCCTTGGTTGGGTCGTTACTAATGGCGCTGCACTTGCTTCGTACCCGATCGACACAGTTCGTAGAAGAATGATGATGACTTCCGGTGAAGCAGTGAAGTACAAGAGCTCCTTCGATGCATTTTCTCAGATTCTGAAGAACGAGGGCCCGAAGTCTCTCTTCAAGGGTGCCGGTGTAAATATTCTTCGAGCTGTTGCCGGAGCTGGTGTCCTTGCCGGTTATGATAAGTTGCAAGTACTTGCACTTGGTAAGAAGTATGGATCTGGTGGGGCT 1173 47.14 MVDQSPCPTIVQKVAGQLNLPSLTPYHQGCERVFQRPAIYQRLATFENYSSPAMALSCRIPTDVSSVAVTSSAIFVPAPAEKSNFLIDFLMGGVSGAVSKTAAAPLERMKLLIQNQDELIRSGRLSEPYKGIGDCLRRTIKDEGVVALWRSNTVNVMRYFPTQASHIFWALNFAFKDHFKSLFNFKKERDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKKGGERQFNGVIDVYRKTLQSDGVAGLYRGFNISCAGIIIYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWVVTNGAALASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQILKNEGPKSLFKGAGVNILRAVAGAGVLAGYDKLQVLALGKKYGSGGA 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1452373 1453946 - Bma030560 Bma13g00137 92866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00137 391 PRINTS Mitochondrial carrier protein signature 259 277 IPR002067 GO:0055085
Bma13g00137 391 PRINTS Mitochondrial carrier protein signature 151 171 IPR002067 GO:0055085
Bma13g00137 391 PRINTS Mitochondrial carrier protein signature 303 325 IPR002067 GO:0055085
Bma13g00137 391 PRINTS Mitochondrial carrier protein signature 101 115 IPR002067 GO:0055085
Bma13g00137 391 PRINTS Mitochondrial carrier protein signature 209 227 IPR002067 GO:0055085
Bma13g00137 391 PRINTS Mitochondrial carrier protein signature 88 101 IPR002067 GO:0055085
Bma13g00137 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 83 182 IPR018108 -
Bma13g00137 391 Gene3D Mitochondrial carrier domain 86 387 IPR023395 -
Bma13g00137 391 Pfam Mitochondrial carrier protein 83 185 IPR018108 -
Bma13g00137 391 Pfam Mitochondrial carrier protein 295 379 IPR018108 -
Bma13g00137 391 Pfam Mitochondrial carrier protein 193 289 IPR018108 -
Bma13g00137 391 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 391 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma13g00137 391 PRINTS Adenine nucleotide translocator signature 168 180 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma13g00137 391 PRINTS Adenine nucleotide translocator signature 299 315 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma13g00137 391 PRINTS Adenine nucleotide translocator signature 129 150 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma13g00137 391 PRINTS Adenine nucleotide translocator signature 85 97 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma13g00137 391 PRINTS Adenine nucleotide translocator signature 194 207 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma13g00137 391 SUPERFAMILY Mitochondrial carrier 82 376 IPR023395 -
Bma13g00137 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 194 286 IPR018108 -
Bma13g00137 391 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 391 - -
Bma13g00137 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 294 380 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00137 Bma-Chr13:1452373 Bma15g00461 Bma-Chr15:5042597 0 dispersed
Bma13g00137 Bma-Chr13:1452373 Bma13g00138 Bma-Chr13:1455472 0 tandem
Bma10g00896 Bma-Chr10:17133712 Bma13g00137 Bma-Chr13:1452373 0 wgd
Bma13g00137 Bma-Chr13:1452373 Bma09g00848 Bma-Chr9:47512342 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00137 K05863 - zju:107417672 585.489