Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00138 ATGGCTGATCAGGCGCAATACCCCACTATTGTTCAGAAGGTGGCTGGCCAGCTCCACGTCCGTTCTTCTCTCACCCCATTTTATCAGGGTTGTGATGGGGTTTTCCAGAGACCTGCTATGTACCAAAGGCGTGCTACTTTCGGAAATTACTCAAACCCCGCAATGTCACAGTCTTGCAGAATTCCAACTGATTTTTTTAGTAATGGAGCAACTGCCTCTCCCATATTCGTCCCAGCACCTTCAGAGAAAGGAAACTTTCTCGTTGATTTTCTTATGGGCGGTGTCTCTGCTGCTGTATCTAAGACAGCTGCTGCTCCGATTGAGCGCGTGAAGCTTTTAATCCAAAACCAAGATGAGATGATCAAATCTGGCAGGCTTTCTGAACCCTACAAAGGCATTGGTGATTGTTTCAGTCGAACAATGAAAGATGAGGGTTTGGTTGCACTGTGGAGGGGGAATACTGCTAATGTCATCCGCTACTTCCCCACTCAGGCTCTGAACTTTGCATTCAAGGACTACTTTAAGAGGCTTTTCAACTTTAAGAAAGATAGAGACGGATACTGGAAATGGTTTGCTGGGAACTTGGCTTCGGGTGGTGCAGCTGGTGCTTCGTCCCTTCTATTTGTCTATTCCCTTGATTATGCCCGTACCCGATTGGCCAACGATTCCAAGGCTGCAAAGAAGGGCGGTGAAAGACAATTCAATGGCCTGATTGATGTCTACAGGAAGACATTACAATCTGATGGTGTTGCTGGGCTTTACCGTGGATTCAACATTTCATGCGTTGGTATCATTGTCTATCGAGGTCTTTACTTTGGAATGTATGATTCTCTGAAGCCAGTCTTGTTGACTGGAAAGTTGCAGGATAGCTTCTTTGCTAGCTTTGCCCTTGGTTGGCTGATTACTAATGGTGCTGGACTCGCTTCATACCCGATCGACACAGTTCGCAGAAGAATGATGATGACTTCTGGCGAAGCAGTAAAGTACAAGAGCTCCTTCGATGCATTTTCTCAGATTCTGAAGAACGAGGGCCCGAAGTCTCTCTTCAAGGGTGCCGGTGCAAATATTCTCCGGGCAGTCGCCGGAGCAGGTGTCCTAGCTGGTTATGACAAGTTGCAGGTACTTGTACTTGGTAAGAAGTATGGATCTGGTGGTGCT 1158 46.98 MADQAQYPTIVQKVAGQLHVRSSLTPFYQGCDGVFQRPAMYQRRATFGNYSNPAMSQSCRIPTDFFSNGATASPIFVPAPSEKGNFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFSRTMKDEGLVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDSKAAKKGGERQFNGLIDVYRKTLQSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQILKNEGPKSLFKGAGANILRAVAGAGVLAGYDKLQVLVLGKKYGSGGA 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1455472 1457053 - Bma030561 Bma13g00138 92867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00138 386 PRINTS Adenine nucleotide translocator signature 130 151 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma13g00138 386 PRINTS Adenine nucleotide translocator signature 86 98 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma13g00138 386 PRINTS Adenine nucleotide translocator signature 189 202 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma13g00138 386 PRINTS Adenine nucleotide translocator signature 163 175 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma13g00138 386 PRINTS Adenine nucleotide translocator signature 294 310 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma13g00138 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 84 177 IPR018108 -
Bma13g00138 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 189 281 IPR018108 -
Bma13g00138 386 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 386 - -
Bma13g00138 386 Pfam Mitochondrial carrier protein 188 284 IPR018108 -
Bma13g00138 386 Pfam Mitochondrial carrier protein 290 376 IPR018108 -
Bma13g00138 386 Pfam Mitochondrial carrier protein 85 181 IPR018108 -
Bma13g00138 386 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 386 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bma13g00138 386 Gene3D Mitochondrial carrier domain 87 382 IPR023395 -
Bma13g00138 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 289 375 IPR018108 -
Bma13g00138 386 PRINTS Mitochondrial carrier protein signature 102 116 IPR002067 GO:0055085
Bma13g00138 386 PRINTS Mitochondrial carrier protein signature 298 320 IPR002067 GO:0055085
Bma13g00138 386 PRINTS Mitochondrial carrier protein signature 204 222 IPR002067 GO:0055085
Bma13g00138 386 PRINTS Mitochondrial carrier protein signature 152 172 IPR002067 GO:0055085
Bma13g00138 386 PRINTS Mitochondrial carrier protein signature 254 272 IPR002067 GO:0055085
Bma13g00138 386 PRINTS Mitochondrial carrier protein signature 89 102 IPR002067 GO:0055085
Bma13g00138 386 SUPERFAMILY Mitochondrial carrier 84 371 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00889 Bma-Chr10:16891152 Bma13g00138 Bma-Chr13:1455472 0 dispersed
Bma10g00896 Bma-Chr10:17133712 Bma13g00138 Bma-Chr13:1455472 0 dispersed
Bma13g00138 Bma-Chr13:1455472 Bma15g00461 Bma-Chr15:5042597 0 dispersed
Bma13g00137 Bma-Chr13:1452373 Bma13g00138 Bma-Chr13:1455472 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00138 K05863 - zju:107417672 648.662