Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00147 ATGGAAATAGCTACAATGGATAGGACTACGAAGTCGCCGGAGGGTGGGGAAGATCGGACGGCGACCGGAGTTCAACCGATCAAGCCTTTACCCTTCAGCAATGGTCTTTTAAAGAGGCATAATCGTCTTAATCATGATAATAATCGTGACAACCTCAACTCCGCCGCTAAATCCGCCGTCGTTTCCTACAAAGAATGCCTGAAAAACCATGCGGCTAGCTTAGGAACTCACGCTTTAGATGGGTGTGGAGAATTCATTCCTTCTTCTTCTGCAACTTCTTCCGATCCCACTTCTTTAAAATGCGCCGCTTGCGGATGTCACCGGAACTTCCACCGTCGAGAGCCCGACGAACCGATTTTTCCGGCTCCAACAACACAAGTAATCGAGTACCTGCCTCACCACCGCCACCACCCGCCTCCACCCCCTCAGCCGATCAGCCGGAGTCCGAATTCGGCGTCGCCTCCGCCGATCTCGTCTTCCTACTACCCCTCAGCTCCCCACATGCGTCTTGCTCTATCATCTGGGACTATCGCCCCCTCCGGATCCGACTAA 552 53.26 MEIATMDRTTKSPEGGEDRTATGVQPIKPLPFSNGLLKRHNRLNHDNNRDNLNSAAKSAVVSYKECLKNHAASLGTHALDGCGEFIPSSSATSSDPTSLKCAACGCHRNFHRREPDEPIFPAPTTQVIEYLPHHRHHPPPPPQPISRSPNSASPPPISSSYYPSAPHMRLALSSGTIAPSGSD 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1565387 1565938 - Bma008838.1 Bma13g00147 92876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00147 183 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 8 180 - -
Bma13g00147 183 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 8 180 - -
Bma13g00147 183 MobiDBLite consensus disorder prediction 1 51 - -
Bma13g00147 183 Pfam ZF-HD protein dimerisation region 61 115 IPR006456 -
Bma13g00147 183 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 63 114 IPR006456 -
Bma13g00147 183 MobiDBLite consensus disorder prediction 137 151 - -
Bma13g00147 183 MobiDBLite consensus disorder prediction 132 164 - -
Bma13g00147 183 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 63 114 IPR006456 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g00421 Bma13g00147 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00147 Bma-Chr13:1565387 Bma14g01426 Bma-Chr14:27153876 5.17E-59 dispersed
Bma13g00147 Bma-Chr13:1565387 Bma03g00988 Bma-Chr3:10644405 7.67E-22 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58199 PF04770 ZF-HD_dimer 4.50E-29 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00147 - - jre:108984667 174.096