Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00168 ATGTTAGAAACTGTGCTTAGGCAAGGGGTGCTTGGGGAGGATGACACAGGTGAAGAATCACCAAAAAATATTAAGCTTCCTTCTCGTCGGCCTTCAATCGTATGCGAGAGTTGCTTATATTTTCTAGAGAAAGATTTACGAGCTAGAGCATTCCATATCATGGACCCAAAAGGCATTATAGAAATGATTCTCCTCTTTCTCGAGGAAAAGAACGAATCGACGATTTTCCCTCTGCTCGATTATAAAATGGGCAGCACAAACAGGATTCTCCCATTTCTTGGTAGCTGGAGGGGCCATTCCATAACCAAGCGCAGTGGTGTTTATGGAGCAACAATTGCAGAGGCAGATACTGTCGCAACACTTGAAATAGACAGTGAGGGTCAGATCATTCAGGATATAACCTCGACCTCAATTAGCGGTGTTACGACAACGGTGCATTGGACGGGTACCCAATCGGACAATCTGATTACTTTCGACGGTGGATATCAGTTGACACTATTGCCAGGTGGCATGATGATGGGATACCCAAGTGACGTGTCAAAGAGCGTTGCAGAATCGAAATCGTTCCACTTGGAGTTCTGTTGGATTCAAGGACCTGATAAGAGGCAGAGGTTGGTTAGAACTTATGATGCAGAAGGATTGGCGGTGTCAACAACCTATTTTTCTGAGATGAAAATGTGA 681 44.49 MLETVLRQGVLGEDDTGEESPKNIKLPSRRPSIVCESCLYFLEKDLRARAFHIMDPKGIIEMILLFLEEKNESTIFPLLDYKMGSTNRILPFLGSWRGHSITKRSGVYGATIAEADTVATLEIDSEGQIIQDITSTSISGVTTTVHWTGTQSDNLITFDGGYQLTLLPGGMMMGYPSDVSKSVAESKSFHLEFCWIQGPDKRQRLVRTYDAEGLAVSTTYFSEMKM 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1958250 1959381 - Bma008859.1 Bma13g00168 92897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00168 226 Gene3D - 85 226 IPR012674 -
Bma13g00168 226 PANTHER NMDA RECEPTOR SUBUNIT EPSILON-1, PUTATIVE (DUF3598)-RELATED 1 226 - -
Bma13g00168 226 SUPERFAMILY Lipocalins 86 225 IPR012674 -
Bma13g00168 226 Pfam Domain of unknown function (DUF3598) 39 220 IPR022017 -
Bma13g00168 226 PANTHER CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR HOMOLOG, CHLOROPLASTIC 1 226 IPR005527 GO:0032955|GO:0051301
Bma13g00168 226 SUPERFAMILY Lipocalins 7 73 IPR012674 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma13g00168 Bma14g01445 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00168 Bma-Chr13:1958250 Bma13g00172 Bma-Chr13:2005519 2.04E-168 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00168 - - palz:118055085 348.977