Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00191 ATGGCGGTTTTAGTCATCTTTTTTCTTGTGCTGGTTGTTCTTCTCTGTCTCTGTTCTGCTCTGTTGAGATGGAACGAAATGAGGTTCAGGAAGAAGGGTTTTCCTCCTGGAACAATGGGTTGGCCTGTTTTTGGAGAAACCACTGAGTTTCTCAAGCAAGGTCCTGATTTCATGAAAAACCAGAGAGCTAGGTATGGAAGCTTCTTCAAATCTCACATTCTGGGCTGTCCGACGATCGTTTCGATGGATCCAGAGCTGAATAGGTTCATTCTAATGAACGAATCAAAGGGCCTCATCCCCGGTTACCCTGAATCCATGCTCGATATTTTGGGCCGCTGCAACATCGCCGCCGTCCACGGCGCCGAACATAAGAAAATGCGAGGTGCTCTGCTTTCTCTGGTCAGCCCTCCGACGATCAGAGACCTTGTTCTTCCTAAAATCGACCAGTTTATGAGACGCCATTTGAGTACTTGGGAGGGAAAGCTCATCGACATTCAGGAGAAAACTAAAGAGATGGCGCTGTTTTCTTCTCTGAAGCAGATCGCCGGACTGGAATCTGGGCCTCTGTTTGAATCGTTTATACCGGAGTTCTTCAAGCTGGTTTTGGGCACTCTTTCGTTGCCTATTGATCTTCCCGGCACAAACTACCGGCGAGGATTTCAGGCGAGGAAGAAGATAGTGAGTTTTCTGAGAGGTTTGATAGCAGAGAGAAGAAACTCCGGCGAAACCCACAGCGACATGCTGGGGAATCTGATGAGCGAGGAGAACAGATTTAAGCTTAACGATGAAGAAATTATAGATCAGCTCATCACCATTTTGTACTCTGGATTCGAGACTGTTTCCACCACCTCCATGATGTCCCTCAAGTATCTGCACGATCACCCTAAAGTTCTTCAACAGCTCAGAAGAGAGCATTTGGCCATTAGAGAGAAGAAAAACCCTGAAGATCCGATCGACTGGAATGACCTTAAATCCATGAAGTTTACTCGCGCAGTTATTCTTGAGACATCAAGATTAGCCACCATTGTTAATGGAGTTTTGAGGAAGACAACAAAGGATATGGAATTAAACGGATTTCTGGTTCCCAAAGGATGGAAGATCTACGTTTATACGAGAGAGATAAATTATGACCAATTTTTATATTCAGATCCACTCTCCTTCAATCCATGGAGATGGCTGGATCAAAGCTCAGAATCTCACAACTATTGCTTCATATTCGGAGGCGGAACCCGGTTTTGTCCTGGAAAAGAACTAGGAATTGCAGAGATTTCTACCTTCCTACATTATTTTGTGACGAGATACAGGTGGGAAGAAGTTGGAGGAGAAAAGCTAGTGAAATTTCCAAGAGTGGAGGCCCCAACTGGGTATCACATAAGAGTCTCATCTTTTGATGACTAG 1398 44.99 MAVLVIFFLVLVVLLCLCSALLRWNEMRFRKKGFPPGTMGWPVFGETTEFLKQGPDFMKNQRARYGSFFKSHILGCPTIVSMDPELNRFILMNESKGLIPGYPESMLDILGRCNIAAVHGAEHKKMRGALLSLVSPPTIRDLVLPKIDQFMRRHLSTWEGKLIDIQEKTKEMALFSSLKQIAGLESGPLFESFIPEFFKLVLGTLSLPIDLPGTNYRRGFQARKKIVSFLRGLIAERRNSGETHSDMLGNLMSEENRFKLNDEEIIDQLITILYSGFETVSTTSMMSLKYLHDHPKVLQQLRREHLAIREKKNPEDPIDWNDLKSMKFTRAVILETSRLATIVNGVLRKTTKDMELNGFLVPKGWKIYVYTREINYDQFLYSDPLSFNPWRWLDQSSESHNYCFIFGGGTRFCPGKELGIAEISTFLHYFVTRYRWEEVGGEKLVKFPRVEAPTGYHIRVSSFDD 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 2274272 2276850 + Bma008882.1 Bma13g00191 92920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00191 465 SUPERFAMILY Cytochrome P450 28 443 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00191 465 Pfam Cytochrome P450 35 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00191 465 PANTHER CYTOCHROME P450 26 10 461 - -
Bma13g00191 465 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 461 - -
Bma13g00191 465 Gene3D Cytochrome P450 25 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00191 465 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00191 465 PRINTS E-class P450 group I signature 370 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00191 465 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00191 465 PRINTS E-class P450 group I signature 413 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00191 465 PRINTS E-class P450 group I signature 330 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00191 465 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00191 465 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00191 465 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00191 465 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00191 465 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00191 465 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00191 Bma-Chr13:2274272 Bma15g00737 Bma-Chr15:14761176 5.07E-83 dispersed
Bma14g00141 Bma-Chr14:2031456 Bma13g00191 Bma-Chr13:2274272 8.55E-66 dispersed
Bma13g00191 Bma-Chr13:2274272 Bma03g00991 Bma-Chr3:10712519 3.73E-88 transposed
Bma13g00191 Bma-Chr13:2274272 Bma06g00127 Bma-Chr6:1710317 1.61E-87 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00191 K09590 - csv:101206858 767.689