Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00215 ATGGCAGCAGTGGCTCTAACAACTCTCTCACTGGTGTTTGTCATTTTGTTTTTGAGGATTGCCTACAATACCCTCTCCTGCTACTGGCTAACACCGAGAAGAATCAGGAAGACGATGGAAAGACAAGGAGTTTTTGGTCCAAAACCTCGCCCTTTGATCGGAAACATACAGGATATGGCTTCTCTTGTCGCTAAATCTACTTCTCAAGACATGAACTCCATTGATCACGACATCGTTTCTCGTCTTCTCCCACATTACGTTGCTTGGTCTGAACAATACGGAAAAAGGTTTGTCTACTGGAACGGAATCGAGCCGAGGATGTGTTTGACAGAGACAGAATTAATTAAAGAATTACTGTCGAAATACAGCTCAATTTCTGGAAAATCATGGCTGCAGCAACAAGGGTGTAAGCATTTCATTGGACGAGGTTTACTAATGGCGAACGGAGAAGACTGGTATCATCAACGTCATATCGTTGCACCAGCATTCATGGGCGATCGACTCAAGAGCTATGCTGGATACATGGTGGAATGCACTAAAGAGATGCTTCAATCTCTTCAAAAAGAAGTGAAAATGGGACGAACGGAGTTTGAAATTGGTGATTATATGACAAAGTTAACGGCTGAGATCATTTCAAGGACCGAATTTGATGGGAATTATGATAAAGGAAAGCAAATTTTCCATTTACTCACTCTTCTTCAACGTCTCTGCGCTCAGGCCAGCCGCCACCTATGTCTTCCCGGAAGCCGGTTTTTTCCAAGCAAGTACAACAGAGAGATAAAGTCATTGAAAATGGAGGTGGAGAGGCTGTTAATGGAGATAATACAAAGCAGGAAAGATTGTGTGGAGATAGGGAGAAGTAACTCTTATGGAAATGACCTAGTGGGCATGTTACTAAACGAGATGCAAAACAAGAAAGAGAGTGGATTCAGCCTGAATCTACAGCTCATAATGGACGAATGCAAGACCTTCTTCTTCGCCGGCCATGAAACCACAGCTCTCCTGCTCACCTGGACTGTCATGTTATTAGCCAACAACCCAACCTGGCAAGAAAAGGTTCGAAAAGAGGTTAAAGAGCTCTGCAATGGCGGAACTCCTTCTGTTGATCATCTTCCCAAACTCTCACTGCTAAATATGGTGATAAACGAATCACTGAGGCTATATCCACCAGCAACTGTTCTACCCAGAATGGCATTTGAAGACATAAAATTAGGCGATCTTCACATCCCAAAAGGGTTGTCAATATGGATTCCAGTTCTGGCAATTCATCACAGCCAAGAACTGTGGGGAAAAGACGCAAACGAATTCAACCCAGAAAGATTTTCTTCCAAATCTTTCTTCAATGGCAGATTCATCCCCTTTGCATCTGGACCCAGAAACTGCGTCGGTCAAGGTTTTGCAATAATGGAAACTAAGATCATCTTAGCCATGTTAATATCAAGCTTTAGCTTTTCTATCTCAGAAAACTATCGCCATGCACCAGTGATCGTCCTCACGATAAAGCCTAAGTATGGGGTTCAAGTTTGTTTGAAGCCCTTAAATCCATGA 1548 42.89 MAAVALTTLSLVFVILFLRIAYNTLSCYWLTPRRIRKTMERQGVFGPKPRPLIGNIQDMASLVAKSTSQDMNSIDHDIVSRLLPHYVAWSEQYGKRFVYWNGIEPRMCLTETELIKELLSKYSSISGKSWLQQQGCKHFIGRGLLMANGEDWYHQRHIVAPAFMGDRLKSYAGYMVECTKEMLQSLQKEVKMGRTEFEIGDYMTKLTAEIISRTEFDGNYDKGKQIFHLLTLLQRLCAQASRHLCLPGSRFFPSKYNREIKSLKMEVERLLMEIIQSRKDCVEIGRSNSYGNDLVGMLLNEMQNKKESGFSLNLQLIMDECKTFFFAGHETTALLLTWTVMLLANNPTWQEKVRKEVKELCNGGTPSVDHLPKLSLLNMVINESLRLYPPATVLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSQELWGKDANEFNPERFSSKSFFNGRFIPFASGPRNCVGQGFAIMETKIILAMLISSFSFSISENYRHAPVIVLTIKPKYGVQVCLKPLNP 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3133433 3136905 + Bma008905.1 Bma13g00215 92944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00215 515 Coils Coil 260 280 - -
Bma13g00215 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 3 509 - -
Bma13g00215 515 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00215 515 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00215 515 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00215 515 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00215 515 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00215 515 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00215 515 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00215 515 Pfam Cytochrome P450 87 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00215 515 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00215 515 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00215 515 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00215 515 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00215 515 SUPERFAMILY Cytochrome P450 46 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00215 515 Gene3D Cytochrome P450 28 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma13g00215 515 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 509 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01121 Bma-Chr1:11849613 Bma13g00215 Bma-Chr13:3133433 0 dispersed
Bma04g01160 Bma-Chr4:29965291 Bma13g00215 Bma-Chr13:3133433 1.54E-98 dispersed
Bma13g00215 Bma-Chr13:3133433 Bma14g02072 Bma-Chr14:44088059 7.39E-114 dispersed
Bma13g00215 Bma-Chr13:3133433 Bma07g01122 Bma-Chr7:44850186 3.58E-104 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00215 K10717 - fve:101290878 891.723