Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00328 ATGTTCTTGAATGGATCTAGTGAAGTTGCTTCTTTGTTCACTCAACAGGGTAGGAAAGGGACCAACCAAGACGCCATGATTGTTTGGGAGAATTTCGGTTCAAGAAGTGACACGATCTTCTGTGGGGTGTTTGATGGGCACGGACCGTATGGCCATGTGGTTGCAAGGAAAGTGAGGGACTCTCTTCCCCTGAAAGTGAAAGCCCAGTGGGAATTCAATTCAGTGTCTGAAGAAGTTGTCCCAGAACTCAGTCCTAATGCTAATGGAGGAACAATCCTGGATGACGACGAAGGAGGAGCTGGAGCCGCCATTGACGGCACCCTATTGGAGAAGCCTGCCGAAAGTTTTCGTACATTAAAGGAATCGTTTTTAAAGGCTTCTAAACTTATGGACAGAGAATTGAGGATGCACCCGAATATTGATTGTTTCTGTAGCGGGACTACGGCCGTGACTTTGGTCAAGCAGGGGGGAAATCTTGTTATTGGAAATGTTGGAGATTCCAGAGCTGTAATGGCTACCAGAGATGAAGACGACTCCCTTGTTGCAGTTCAGTTGACTGTTGATCTGAAACCAAATCTTCCTGGCGAAGAAGAGAGAATCCGCAGCTGTAAAGGTCGGGTCTTTGCTCTTCAAGACGAACCAGAGGTTGCTCGAGTATGGCTTCCGAACAGCGACTCCCCAGGCCTGGCTATGGCGAGAGCTTTTGGAGATTTTTGTCTCAAGGATTTCGGTCTAATATCTGTTCCCGAAATAACTTGTCATCGACTAACCGACAAGGATGAATTCGTTGTCATGGCTACCGATGGGATATGGGACGTTTTATCGAACTCAGAAGTAGTAGAGATTGTAGCATCAGCCCCATCACGATCGACTGCAGCTCGAGCTCTCATAGAGACAGCAGTTCGAGCTTGGCGGTGTAAATATCCCACTTCCAAAGTTGATGATTGTGCTGTAGTTTGCCTCTTCCTCGATTCGAACTCGAACTCAAACGTCCTATCTTTGGCCTCTAATGACAAATCCAAAGAACATCTCTCCTCCGAAGTCCGTGTTTGCAATGGCGGAGCTTCCATTAGCGGGGACCTCTCCCTACACAGTGATCTGAACCGGTCGGGAAAGATACGGACTGTCAAAGACATTTTAGTCGAAGATGAAGATGAAGACAATTTGGCAGAAACAGGGACTGAGTGGTCGGCTCTACAAGGAGTGTCGAGAGTAAACACGTTATTAACTCTGCCGAGATTTGTTCCAACTAAGAAGGACAAGGCTCGGTGA 1272 47.33 MFLNGSSEVASLFTQQGRKGTNQDAMIVWENFGSRSDTIFCGVFDGHGPYGHVVARKVRDSLPLKVKAQWEFNSVSEEVVPELSPNANGGTILDDDEGGAGAAIDGTLLEKPAESFRTLKESFLKASKLMDRELRMHPNIDCFCSGTTAVTLVKQGGNLVIGNVGDSRAVMATRDEDDSLVAVQLTVDLKPNLPGEEERIRSCKGRVFALQDEPEVARVWLPNSDSPGLAMARAFGDFCLKDFGLISVPEITCHRLTDKDEFVVMATDGIWDVLSNSEVVEIVASAPSRSTAARALIETAVRAWRCKYPTSKVDDCAVVCLFLDSNSNSNVLSLASNDKSKEHLSSEVRVCNGGASISGDLSLHSDLNRSGKIRTVKDILVEDEDEDNLAETGTEWSALQGVSRVNTLLTLPRFVPTKKDKAR 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5872581 5874830 + Bma009039.1 Bma13g00328 93057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00328 423 ProSiteProfiles PPM-type phosphatase domain profile. 9 323 IPR001932 -
Bma13g00328 423 Gene3D - 6 325 IPR036457 -
Bma13g00328 423 PANTHER ALPHABET, ISOFORM E-RELATED 4 408 - -
Bma13g00328 423 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 4 408 - -
Bma13g00328 423 SUPERFAMILY PP2C-like 10 325 IPR036457 -
Bma13g00328 423 SMART PP2C_4 1 321 IPR001932 -
Bma13g00328 423 Pfam Protein phosphatase 2C 15 302 IPR001932 -
Bma13g00328 423 CDD PP2Cc 9 323 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00349 Bma-Chr10:3270955 Bma13g00328 Bma-Chr13:5872581 3.79E-130 dispersed
Bma13g00328 Bma-Chr13:5872581 Bma13g00370 Bma-Chr13:6866969 0 dispersed
Bma13g00328 Bma-Chr13:5872581 Bma14g01189 Bma-Chr14:17654222 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00328 - - cit:102625738 565.459