Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00370 TCAAGAGAAAGTAGGGTAATCGATCGTTTGGCTGTTCTGGAGTGCATATTAAACGTTATCAGGGCCCTTAGAATGGGGTCCTGCCTTTCGATTGAAAGCGGGAGCCCTATTCCTGGATCACCAAGTTCTCCCGCAATGGGAGCTAGGAAGAGAAAAACGTCGAAAAAACGATTAGGATCACGTAATTCTTCGTTTGACAATCAAAGGGAAGATCCTCTGCATCGAATTCCAGGGAGGATGTTCTTGAATGGATCTAGTGAAGTTGCTTCTTTGTTCACTCAACAGGGTAGGAAAGGGACCAACCAAGATGCCATGATTGTTTGGGAGAATTTCGGTTCAAGAAGTGACACGATCTTCTGTGGGGTGTTTGATGGGCACGGACCGTATGGCCATATGGTTGCAAGGAAAGTGAGGGACTCTCTTCCCCTGAAAGTGAAAGCCCAGTGGGAATTCAATTCAGTGTCTGAAGAAGTTGTCCCAGAACTCAGTCCTAATGCTAATGGAGGAACAATCCTGGATGACGACGAAGGAGTAGCTGGAGCCGCCATTGACGGCGCCCTATTGGAGAAGCCTGCCGAAAGTTTTCGTACATTGAAGGAATCGTTTTTAAAGGCTTCTAAACTTATGGACAGAGAATTGAGGATGCACCCGAATATTGATTGTTTCTGTAGCGGGACTACGGCCGTGACTTTGGTCAAGCAGGGGGGAAATCTTGTTATTGGAAATGTTGGAGATTCCAGAGCTGTAATGGCTACCAGAGATGAAGATGACTCCCTTGTTGCAGTTCAGTTGACTGTTGATCTGAAACCAAATCTTCCTGGCGAAGAAGAGAGAATCCGCAGCTGTAAAGGTCGGGTCTTTGCTCTTCAAGACGAACCAGAGGTTGCTCGAGTATGGCTTCCGAACAGCGACTCCCCAGGCCTGGCTATGGCGAGAGCTTTTGGAGATTTTTGTCTCAAGGATTTCGGTCTAATATCTGTTCCCGAAATAACTTGTCATCGACTAACCGACAAGGATGAATTCGTCGTCATGGCTACCGATGGGATATGGGACGTGTTATCGAACTCAGAAGTAGTAGAGATTGTAGCATCAGCCCCATCACGATCGACTGCAGCTCGAGCTCTCGTAGAGACAGCAGTTCGAGCTTGGCGGTGTAAATATCCCACTTCCAAAGTCGATGATTGTGCTGTAGTTTGCCTCTTCCTCGATTCGAACTTGAACGTCCTATCATCGGCCTCTAATGACAAATCCAAAGACCATCTCTATTCCGAAGTCCGAGTTTGCAATGGCGGAGCTTCCATTAGCGGGGACCTCTCTCGACACAGTGATCTGAACCGGTCAGGAACGATACGGACTGTCAAAGACATTTTAGTCGAAGAAGAAGATGAAGACAATTTGGCAGAAACAGGCACTGAGTGGTCGGCTCTAGAAGGAGTGTCGAGAGTAAACACGTTATTAACTCTGCCGAGATTTGTTCCAACTAAGAAGGACAAGGCTCGGTGA 1503 47.31 SRESRVIDRLAVLECILNVIRALRMGSCLSIESGSPIPGSPSSPAMGARKRKTSKKRLGSRNSSFDNQREDPLHRIPGRMFLNGSSEVASLFTQQGRKGTNQDAMIVWENFGSRSDTIFCGVFDGHGPYGHMVARKVRDSLPLKVKAQWEFNSVSEEVVPELSPNANGGTILDDDEGVAGAAIDGALLEKPAESFRTLKESFLKASKLMDRELRMHPNIDCFCSGTTAVTLVKQGGNLVIGNVGDSRAVMATRDEDDSLVAVQLTVDLKPNLPGEEERIRSCKGRVFALQDEPEVARVWLPNSDSPGLAMARAFGDFCLKDFGLISVPEITCHRLTDKDEFVVMATDGIWDVLSNSEVVEIVASAPSRSTAARALVETAVRAWRCKYPTSKVDDCAVVCLFLDSNLNVLSSASNDKSKDHLYSEVRVCNGGASISGDLSRHSDLNRSGTIRTVKDILVEEEDEDNLAETGTEWSALEGVSRVNTLLTLPRFVPTKKDKAR 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6866969 6869874 + Bma009101.1 Bma13g00370 93099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00370 500 MobiDBLite consensus disorder prediction 33 72 - -
Bma13g00370 500 Pfam Protein phosphatase 2C 94 381 IPR001932 -
Bma13g00370 500 Gene3D - 84 404 IPR036457 -
Bma13g00370 500 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 25 485 - -
Bma13g00370 500 PANTHER ALPHABET, ISOFORM E-RELATED 25 485 - -
Bma13g00370 500 ProSiteProfiles PPM-type phosphatase domain profile. 88 402 IPR001932 -
Bma13g00370 500 CDD PP2Cc 88 402 IPR001932 -
Bma13g00370 500 SUPERFAMILY PP2C-like 83 403 IPR036457 -
Bma13g00370 500 SMART PP2C_4 77 400 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01365 Bma-Chr2:56054974 Bma13g00370 Bma-Chr13:6866969 5.71E-150 dispersed
Bma08g00589 Bma-Chr8:36747947 Bma13g00370 Bma-Chr13:6866969 6.33E-150 dispersed
Bma12g00748 Bma-Chr12:34361091 Bma13g00370 Bma-Chr13:6866969 1.66E-153 dispersed
Bma13g00328 Bma-Chr13:5872581 Bma13g00370 Bma-Chr13:6866969 0 dispersed
Bma13g00370 Bma-Chr13:6866969 Bma14g01170 Bma-Chr14:17105289 0 dispersed
Bma13g00370 Bma-Chr13:6866969 Bma13g00373 Bma-Chr13:6888273 3.66E-156 proximal
Bma10g00349 Bma-Chr10:3270955 Bma13g00370 Bma-Chr13:6866969 3.37E-130 transposed
Bma14g01306 Bma-Chr14:23889374 Bma13g00370 Bma-Chr13:6866969 7.10E-112 transposed
Bma13g00370 Bma-Chr13:6866969 Bma14g01189 Bma-Chr14:17654222 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00370 - - zju:107412527 650.203