Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00373 TTAGGATCACGTAATTCTTCGTTTGACAATCAAAGGGAAGATCCTCTGCATCGAATTCCAGGGAGGATGTTCTTGAATGGATCTAGTGAAGTTGCTTCTTTGTTCACTCAACAGGGTAGGAAAGGGACCAACCAAGATGCCATGATTGTTTGGGAGAATTTCAGTTCAAGAAGTGACACGATCTTCTGTGGGGTGTTTGATGGGCACGGACCGTATGGCCATATGGTTGCAAGGAAAGTGAGGGACTCTCTTCCCCTGAAAGTGAAAGCCCAGTGGGAATTCAATTCAGTGTCTGAAGAAGTTCTCCCAGAACTCAGTCCTAATGCTAATGGAGGAACAATCCTGGATGACGACGAAGGAGTAGCTGGAGCCGCCATTGTCGGCACCCTATTGGAGAAGCCTGCCGAAAGTTTTCGTACATTGAAGGAATCGTTTTTAAAGGCTTCTAAACTTATGGACAGAGAATTGAGGATGCACCCGAATATTGATTGTTTCTGTAGCGGGACTACGGCCGTGACTTTGGTCAAGCAGGGGGGAAATCTTGTTATTGGAAATGTTGGAGATTCCAGAGCTGTAATGGCTACCAGAGATGAAGATGACTCCCTTGTTGCAGTTCAGTTGACTGTTGATCTGAAACCAAATCTTCCTGGTTAG 654 45.72 LGSRNSSFDNQREDPLHRIPGRMFLNGSSEVASLFTQQGRKGTNQDAMIVWENFSSRSDTIFCGVFDGHGPYGHMVARKVRDSLPLKVKAQWEFNSVSEEVLPELSPNANGGTILDDDEGVAGAAIVGTLLEKPAESFRTLKESFLKASKLMDRELRMHPNIDCFCSGTTAVTLVKQGGNLVIGNVGDSRAVMATRDEDDSLVAVQLTVDLKPNLPG 217
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
13 6888273 6889869 + Bma009104.1 Bma13g00373 93102
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00373 217 ProSiteProfiles PPM-type phosphatase domain profile. 31 217 IPR001932 -
Bma13g00373 217 CDD PP2Cc 31 216 IPR001932 -
Bma13g00373 217 Pfam Protein phosphatase 2C 37 216 IPR001932 -
Bma13g00373 217 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 216 - -
Bma13g00373 217 SUPERFAMILY PP2C-like 24 216 IPR036457 -
Bma13g00373 217 SMART PP2C_4 20 217 IPR001932 -
Bma13g00373 217 PANTHER ALPHABET, ISOFORM E-RELATED 1 216 - -
Bma13g00373 217 Gene3D - 27 217 IPR036457 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00373 Bma-Chr13:6888273 Bma14g01170 Bma-Chr14:17105289 2.47E-128 dispersed
Bma13g00370 Bma-Chr13:6866969 Bma13g00373 Bma-Chr13:6888273 3.66E-156 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00373 - - cic:CICLE_v100115762m 320.472