Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00392 ATGTCGCCGATCAAGGTTCATGGTACTCCTTTCTCAACCGCCGCTGCTCGCGTTCTCTGCTATCTTTTCGAGAAAGATATCGAGTTCGACTTCGTCCTTGTTGATTTGAGAACTGGCGAACACAAGAAGGAGCCTTTCATCTCCCTCAATCCATTTGGCCAGGTTCCAGGGTTTGAAGATGGAGATCTATCGTTATTCGGTAATTATATTGATTCAATCTCGGGCAATCACCCAGTACCTTGTTTATGCGGTGCCTATCTTGAAAAGGGAGCCCATTTGATACCTTCGGACAAGAAGGAAATGGGTACAACATTGACATGGATGAATGTGGAGGCTCACCAATACGACCCCCCTGCGTCCAAGCTGGCTTTCGAGCTGTTTGTGAAGCCCATGCTGGGAATGGGGGCTGCCGATGCAGCAGCGGTGGCGGAAAATGAAGCTAAGTTGTGTAAAGTTCTGGATATATACGAAGTTAAATTGTCCAAGACGAAATACTTGGCTGGCGACTGCTTCACTCTGGCCGATCTGTATCATCTTCCTACTCTTACCTATTTGATGGCCACAGATGCTAAAAAGGTATTCGAATCACACCCACATGTCAATCTCTGGGTTACTGAGATTATGTCCAGGCCATCTTGGGGTAAGGTCCTGGCAATGAGAAACACAGCTTCAAGATCTAGCTGTTTAATTTTGTTTTACTTGTTCAATAAACTGGCCAGGCCTAAGTCTTTTCTTTTTTGTTCAATTTTCTCTGAAGATTGTTCTGTTCTGAGTTTGAACTATATGGAAGTTGTTTCTTCTATCAAATTTGTCTATCGTCCGATAAATCATCCATGA 837 44.21 MSPIKVHGTPFSTAAARVLCYLFEKDIEFDFVLVDLRTGEHKKEPFISLNPFGQVPGFEDGDLSLFGNYIDSISGNHPVPCLCGAYLEKGAHLIPSDKKEMGTTLTWMNVEAHQYDPPASKLAFELFVKPMLGMGAADAAAVAENEAKLCKVLDIYEVKLSKTKYLAGDCFTLADLYHLPTLTYLMATDAKKVFESHPHVNLWVTEIMSRPSWGKVLAMRNTASRSSCLILFYLFNKLARPKSFLFCSIFSEDCSVLSLNYMEVVSSIKFVYRPINHP 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7149386 7150439 - Bma009129.1 Bma13g00392 93121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00392 278 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 4 250 - -
Bma13g00392 278 Pfam Glutathione S-transferase, C-terminal domain 117 211 IPR004046 -
Bma13g00392 278 SFLD Main (cytGST) 1 220 - -
Bma13g00392 278 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 97 245 IPR010987 -
Bma13g00392 278 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 98 IPR004045 -
Bma13g00392 278 SFLD Main.5: Phi-like 1 220 - -
Bma13g00392 278 SUPERFAMILY GST C-terminal domain-like 90 218 IPR036282 -
Bma13g00392 278 Gene3D Glutaredoxin 1 82 - -
Bma13g00392 278 PANTHER GLUTATHIONE S-TRANSFERASE RHO 4 250 - -
Bma13g00392 278 Pfam Glutathione S-transferase, N-terminal domain 3 66 IPR004045 -
Bma13g00392 278 CDD GST_C_Phi 99 217 IPR034347 -
Bma13g00392 278 Gene3D - 97 221 - -
Bma13g00392 278 SUPERFAMILY Thioredoxin-like 1 66 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01390 Bma-Chr4:48154233 Bma13g00392 Bma-Chr13:7149386 1.15E-73 dispersed
Bma13g00049 Bma-Chr13:650788 Bma13g00392 Bma-Chr13:7149386 2.00E-45 dispersed
Bma13g00392 Bma-Chr13:7149386 Bma14g01123 Bma-Chr14:14207084 1.15E-46 dispersed
Bma13g00392 Bma-Chr13:7149386 Bma10g01002 Bma-Chr10:23846156 1.07E-148 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00392 K00799 - csv:101212771 266.159