Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00430 ATGGAAGCGAATGAAAACCCACTCAGCCCCTACTACCACCTCCAGCAGCAGCAGCATCACCACCACCAGAGCCCCACCACTGCCTCAACCACCGCTACCATCTTCACGTCATCCACCAATGGCCTTCTCCCAAGTGCCCTTCATATGTCTTCTCCGGCCACTGCGACAACCACTGACACGGGGGCCCACATGCTCTATCCTCATTCTGCGCCGTCTGCGGCGGTGTCTCCGTCCCCGTTGGAGTCTGTTCGGCGGAAGAGAGGGAGACCCAGAAAGTATGGCACCCCAGAAGAGGCTTTAGCCGCGAAGAAAGCTGCGACCGCTTCCGCCCATTCTTCCACTTCGAGGGAGAAGAAGCACCGGGGTTCTTCTTTTGCTCCTTCTGCCTCTTCGTTTTCTGAATCTTCGAAGAAATCCCAACTAGGTGCTCTCGGAAACGCTGGACAAGGTTTCACACCACACGTACTCAATGTTGCAGCTGGTGAGGACGTGGGCCAAAAAATTATGTTGTTCATGCAACAAAGTAAGCGGGAAATGTGTGTTCTTTCTGCATCAGGGTCAATCTCTAATGCAGCTCTCCGACAGCCAGCCACATCAGGAGGTAATATCGCATATGAGGGTCGTTTTGAGATTATCTCACTAAGTGGATCATATGTGCGAACTGAGCTCGGAGGGAGGACCGGCGGCCTCAGTGTATGTCTGTCCAGTGCCGATGGTCAAATTGTTGGGGGAGGAGTTGGTGGGCCTTTGAAAGCCTTAGGACCCGTTCAGGTCATTGTGGGTACATTTCAAATGGACTCGAAGAAAGAAGCAATCAGCGGAGCGAAAGGCGACGCAGCTGTAAGCAAGCTGCCATCAATCGGTGGCCTATCAGGATCAAGTTTAGGCTATCGTTCAACAATAGAGCCGTCTGGGAGAAATCCCGTGAGGGGAAACGACGACGATCATCAAGTAATGGGCGGTAGCCATTTTATCCTTCAACCCCACGCTGTACACTTCTCTTCACGAACCACCGATTGGATGAACAGTTCAGATCCTACCGCCACCGCTGGTTATGAATTGGCAGGAAGAGTTGGTCGTGGGGCAAACCAATCTCGAGAAAACGGAGACTACGATCAGATTCCGGACTAG 1131 52.7 MEANENPLSPYYHLQQQQHHHHQSPTTASTTATIFTSSTNGLLPSALHMSSPATATTTDTGAHMLYPHSAPSAAVSPSPLESVRRKRGRPRKYGTPEEALAAKKAATASAHSSTSREKKHRGSSFAPSASSFSESSKKSQLGALGNAGQGFTPHVLNVAAGEDVGQKIMLFMQQSKREMCVLSASGSISNAALRQPATSGGNIAYEGRFEIISLSGSYVRTELGGRTGGLSVCLSSADGQIVGGGVGGPLKALGPVQVIVGTFQMDSKKEAISGAKGDAAVSKLPSIGGLSGSSLGYRSTIEPSGRNPVRGNDDDHQVMGGSHFILQPHAVHFSSRTTDWMNSSDPTATAGYELAGRVGRGANQSRENGDYDQIPD 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 7990869 7995457 + Bma009181.1 Bma13g00430 93159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00430 376 MobiDBLite consensus disorder prediction 1 30 - -
Bma13g00430 376 SUPERFAMILY AF0104/ALDC/Ptd012-like 149 263 - -
Bma13g00430 376 MobiDBLite consensus disorder prediction 46 63 - -
Bma13g00430 376 CDD DUF296 152 263 IPR005175 -
Bma13g00430 376 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 28 368 IPR039605 GO:0003680
Bma13g00430 376 Gene3D - 153 277 - -
Bma13g00430 376 MobiDBLite consensus disorder prediction 295 320 - -
Bma13g00430 376 MobiDBLite consensus disorder prediction 46 133 - -
Bma13g00430 376 ProSiteProfiles PPC domain profile profile. 147 285 IPR005175 -
Bma13g00430 376 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 28 368 - -
Bma13g00430 376 MobiDBLite consensus disorder prediction 337 376 - -
Bma13g00430 376 Pfam Plants and Prokaryotes Conserved (PCC) domain 153 264 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00198 Bma-Chr9:8043734 Bma13g00430 Bma-Chr13:7990869 0 dispersed
Bma13g00428 Bma-Chr13:7914090 Bma13g00430 Bma-Chr13:7990869 8.80E-97 dispersed
Bma13g00430 Bma-Chr13:7990869 Bma06g01189 Bma-Chr6:48961601 4.96E-49 dispersed
Bma13g00429 Bma-Chr13:7928723 Bma13g00430 Bma-Chr13:7990869 8.10E-45 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00430 - - mnt:21407278 396.741