Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00432 ACAGAAATGGATTCTTCCTCCGTCTTCTTCTCTCGTTCATCTACGTCTTCCTCTTCAATGGACTCTTTATCGTGGAAAACCAGCTTTAATTTGGAGAAGGGTCTCTTGCCTTTCAATCAGAAAGATTCCGAGGAAATGCTACTGTACGGAGTTCTTTCGGAGGCCGTCGCCGATCGTTCTTCCGATTCCGATTCTCCGACCAAGGTCGCGAAGGATCAGGATGAGGTGAACTCGAAGTCATCGAAAGCTTCAGAGGTTTCTTACAGAGGAGTGAGGAGAAGGCCGTGGGGGAAATTCGCGGCGGAGATCCGAGACTCGACGAGAAATGGAATCAGGGTTTGGCTGGGGACGTTCGACACGGCGGAGGCGGCGGCGCTGGCTTACGATCAAGCTGCATTCGCGATGCGAGGATCAACGGCGGTGCTTAACTTCCCGGCGCAAATGGTGGAGCAATCACTGTGCGAAATGAATTGCGGATTGGAGGAAGGAGGTTCCCCTGTTCTGGCTCTGAAAAAGAAGAATTCGACGAAGAGAAAACCTAGAAATTGGAAGAAGAAAGAGAATCGAGAAAATGTTGTGGTATTTGAAGATTTGGGAGCAGATTATTTGGAGGAGCTTCTGGGGCTGTCCGACGCTTCGTCTACTCCCTACTGA 654 50.31 TEMDSSSVFFSRSSTSSSSMDSLSWKTSFNLEKGLLPFNQKDSEEMLLYGVLSEAVADRSSDSDSPTKVAKDQDEVNSKSSKASEVSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFDTAEAAALAYDQAAFAMRGSTAVLNFPAQMVEQSLCEMNCGLEEGGSPVLALKKKNSTKRKPRNWKKKENRENVVVFEDLGADYLEELLGLSDASSTPY 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8000882 8001535 + Bma009183.1 Bma13g00432 93161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00432 217 ProSiteProfiles AP2/ERF domain profile. 87 145 IPR001471 GO:0003700|GO:0006355
Bma13g00432 217 MobiDBLite consensus disorder prediction 56 87 - -
Bma13g00432 217 MobiDBLite consensus disorder prediction 64 79 - -
Bma13g00432 217 PANTHER DNA-BINDING DOMAIN 31 209 IPR044808 GO:0003700|GO:0009873
Bma13g00432 217 CDD AP2 88 147 IPR001471 GO:0003700|GO:0006355
Bma13g00432 217 Gene3D AP2/ERF domain 87 147 IPR036955 GO:0003700|GO:0006355
Bma13g00432 217 PRINTS Ethylene responsive element binding protein signature 88 99 IPR001471 GO:0003700|GO:0006355
Bma13g00432 217 PRINTS Ethylene responsive element binding protein signature 111 127 IPR001471 GO:0003700|GO:0006355
Bma13g00432 217 SUPERFAMILY DNA-binding domain 88 146 IPR016177 GO:0003677
Bma13g00432 217 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 31 209 - -
Bma13g00432 217 MobiDBLite consensus disorder prediction 1 23 - -
Bma13g00432 217 Pfam AP2 domain 88 137 IPR001471 GO:0003700|GO:0006355
Bma13g00432 217 SMART rav1_2 87 151 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma13g00432 Bma14g01233 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00790 Bma-Chr2:42253358 Bma13g00432 Bma-Chr13:8000882 1.67E-61 dispersed
Bma13g00432 Bma-Chr13:8000882 Bma13g00712 Bma-Chr13:20969091 7.98E-58 dispersed
Bma13g00432 Bma-Chr13:8000882 Bma14g01233 Bma-Chr14:19694001 1.52E-87 wgd
Bma13g00432 Bma-Chr13:8000882 Bma14g01225 Bma-Chr14:19046272 4.41E-35 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58215 PF00847 AP2 2.90E-15 CL0081 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00432 K14516 - fve:101312740 240.736