Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00443 ATGTCGAACAAGACCCGTGTTTTACTATCCCTTTTCTGTCTGACTGTTTTGTTGAATGTGTTTGATGGTTTGGCCTTAGATTCAAAGCCATTGCTCTTAGGGTGTGGCTCGGCCAAAGAGGGTACAGACGAGGATGGAAGAAAATGGGGATCTGATTCGAACTTCCTCAATTCGAGTAACTCGGTAATGGCCACAGTCCAATTTCAAGACCCTTCTCTTACTTCTCAGATTCCATACATGGATGCCAGAATTTTCACCTCTGAAGCGACCTATAATTTCCCGGTAGTGGCCGGAAAGCGATATTGGCTCAGGCTCCATTTCTACCCAGCAGTTTATGGTTCTAACAATGCTGCAGAATCCTATTTCTCTGTGATGGCAAATGAGCTCACTCTGCTGAAGAATTTCAGCGCCCAATTGACATGTCAGGCCTTTACACAAGCTTATATTGTGAGGGAATATTCAATTGCACCGTCGAATTCTGATTTGTTGAGGCTTAAATTTAAGCCAGATGCGGGATTTGCTTTTATCAATGGGATTGAGTTGATTCCAATGCCAGATCTTTTTGACATTGAACCAGCTTTGGTTGGGGCCACTGATCAAACCGTCGAAGTTAAAAGCTCGAATTTGCAGACTATGTTTAGGTTGAATGTCGGCGGGCAGTATATTTCTCCGATCAACGATTCGGGCCTCAGCCGGACCTGGTATGACGATCTTCCTTACATCTATGGGGCTGCAACTGGAGTTACAAATGAAGCAAGCCAAAACGTTAAGATAAAATATGAAAATATGCCTCAATATGTAGCTCCTGTTGACATTTATAGAACCTCGAGATCTATGGGTAATGACAAAAATGTTAATCTAGGCTACAATCTCACTTGGGTGTTTCAGCAAATTGATCCAAATTTCATGTACCTGGTGAGACTCCATTTCTGTGATTACTTTCTGACCAAAGCCAATCAGATTGTTTTCGACATCTTCGTCAACAATCAAACGGCTCAAAACACCGCCGATGTGATTGCCTGGAGCGGCGGAAAGGGTGTGCCGATTTACAAAGACTTCGCCATATACGTTTCTAAAGATGAGCAGCTTTGGCTGGCATTGCATCCATCTTCCGCAACCAATCCTGAATTCTTCGACGCAATTCTCAATGGAGTTGAGATATTCAAACTGGACTCGACTCAAAACTTGGCGGGTCCGAATCCGAGCCCCTCAGATTTTCAAGTCAAGGTGGAGGCTAAATCGCCAAAATCTTTCGAAAAAAAACACAACAGTAATTCTCATATGATCGGCGGGGCTGCCGGAGGAGCTGCAGCCGTTGTGGTGGCTGCCTTGTGCTTTGCTGTGTATCAAAAGAAGAACAGAGTTCATGGGACAGAGACGCATACTTCGAGCTGGCTGCCAATCCAAGGAAATTCGCATTCGAGCGGAAGCAAATCGACAATATCGGGGAAAAGTACAGCCAGCAATTTGGCTCAAGGACTTGCCCGCCATTTCTCTTTGCCGGAGATCTTACAGGCCACGAAGCGTTTTGACGAGTCTAATGTCATCGGAGTCGGAGGATTCGGGAAAGTTTATAAGGGAGTCATCGACGGAGGGACGAAAGTCGCAATTAAGAGGTCGAATCCATCTTCCGAGCAGGGAGTTCACGAGTTTCTGACCGAAATCGATTTGCTCTCGAAGCTGAGACACAAACACTTAGTGTCTTTGATCGGCTTCTGCGATGAAGATAATGAAATGTGCTTAGTTTATGACTACATGGGGCAGGGGACTCTGAGGGAGCACATTTACAAGACGAGCAAAACCCGTCTTTCGTGGAAGCAACGGCTCGAGATTTGCATCGGAGCCGCCAGAGGGCTGCACTACCTTCACACCGGAGCTCAATACACAATCATTCACCGAGATGTCAAAACGACTAACATTCTCTTGGATGATAACTGGGTGGCTAAGGTTTCAGATTTCGGCCTCTCCAAAACAGGTCCAAATATGGCAAACGGCCATGTCAGTACAGTCGTTAAAGGCAGCTTCGGCTACTTAGATCCCGAGTATTTCCGCCGGCAACAGTTGACGGAGAAATCGGACGTTTATTCCTTCGGAGTCGTTCTTTTCGAAGTCCTCTGCGCAAGGCCGGCCCTTAACCCTAGCCTCCCGAAAGAGCAGGTCAGTCTTGCAGATTGGGCATTGCACTGCATAAGAAAAGGAATCCTCGAGGATATTATCGACCCCCATCTCAAAGGGAAGATCAATCCCGAATGTTTGAAGAAATTCACCGATGCGGCCGAGAAATGTTTGGACGATCATGGACTCGAACGCCCTTCGATGGGCGATGTTTTGTGGAATCTTGAATTTGCACTTCAATTGCAGGAAACTGAAGATGGTTCGACTCGTTCTTGTTCGAGGATCAACGACGGCGAATTTGAGGACTCGAGCCGGCGAAGCCAGAACGTGGCCGTTCATTACAACAATCTCAGCCTTGGATCCGAACACGAACTAACTGAAGAATCTAAAGATACTACTGGCAATGGTGTCTTCTCGCAGATTGTTAATCCGAAGGGACGGTAA 2559 46.35 MSNKTRVLLSLFCLTVLLNVFDGLALDSKPLLLGCGSAKEGTDEDGRKWGSDSNFLNSSNSVMATVQFQDPSLTSQIPYMDARIFTSEATYNFPVVAGKRYWLRLHFYPAVYGSNNAAESYFSVMANELTLLKNFSAQLTCQAFTQAYIVREYSIAPSNSDLLRLKFKPDAGFAFINGIELIPMPDLFDIEPALVGATDQTVEVKSSNLQTMFRLNVGGQYISPINDSGLSRTWYDDLPYIYGAATGVTNEASQNVKIKYENMPQYVAPVDIYRTSRSMGNDKNVNLGYNLTWVFQQIDPNFMYLVRLHFCDYFLTKANQIVFDIFVNNQTAQNTADVIAWSGGKGVPIYKDFAIYVSKDEQLWLALHPSSATNPEFFDAILNGVEIFKLDSTQNLAGPNPSPSDFQVKVEAKSPKSFEKKHNSNSHMIGGAAGGAAAVVVAALCFAVYQKKNRVHGTETHTSSWLPIQGNSHSSGSKSTISGKSTASNLAQGLARHFSLPEILQATKRFDESNVIGVGGFGKVYKGVIDGGTKVAIKRSNPSSEQGVHEFLTEIDLLSKLRHKHLVSLIGFCDEDNEMCLVYDYMGQGTLREHIYKTSKTRLSWKQRLEICIGAARGLHYLHTGAQYTIIHRDVKTTNILLDDNWVAKVSDFGLSKTGPNMANGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPSLPKEQVSLADWALHCIRKGILEDIIDPHLKGKINPECLKKFTDAAEKCLDDHGLERPSMGDVLWNLEFALQLQETEDGSTRSCSRINDGEFEDSSRRSQNVAVHYNNLSLGSEHELTEESKDTTGNGVFSQIVNPKGR 852
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8238040 8366190 - Bma030589 Bma13g00443 93172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00443 852 Pfam Malectin-like domain 34 389 IPR024788 -
Bma13g00443 852 MobiDBLite consensus disorder prediction 795 811 - -
Bma13g00443 852 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Bma13g00443 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Bma13g00443 852 Gene3D Phosphorylase Kinase; domain 1 471 585 - -
Bma13g00443 852 Pfam Protein tyrosine and serine/threonine kinase 514 777 IPR001245 GO:0004672|GO:0006468
Bma13g00443 852 MobiDBLite consensus disorder prediction 827 852 - -
Bma13g00443 852 PANTHER RECEPTOR-LIKE PROTEIN KINASE ANXUR2 22 835 - -
Bma13g00443 852 MobiDBLite consensus disorder prediction 793 812 - -
Bma13g00443 852 Gene3D - 208 391 - -
Bma13g00443 852 Gene3D - 31 184 - -
Bma13g00443 852 PANTHER OS07G0166700 PROTEIN 22 835 IPR045272 GO:0004714|GO:0006468
Bma13g00443 852 CDD STKc_IRAK 516 781 - -
Bma13g00443 852 ProSiteProfiles Protein kinase domain profile. 510 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma13g00443 852 Gene3D Transferase(Phosphotransferase) domain 1 586 803 - -
Bma13g00443 852 MobiDBLite consensus disorder prediction 459 484 - -
Bma13g00443 852 SMART serkin_6 510 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma13g00443 852 SUPERFAMILY Protein kinase-like (PK-like) 496 779 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01375 Bma-Chr4:47356247 Bma13g00443 Bma-Chr13:8238040 0 dispersed
Bma13g00443 Bma-Chr13:8238040 Bma14g01243 Bma-Chr14:19989117 0 dispersed
Bma13g00443 Bma-Chr13:8238040 Bma02g00448 Bma-Chr2:6850841 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66844 PF12819 Malectin_like 2.00E-40 CL0202 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00443 - - csv:101219475 1202.96