Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00451 ATGGCTCTGAGGTTCAGAAAACACGGTGAAGTAGCTTTCGCCGATTGCGAACGATACTCTGGAGCGAAGAACCACAGGCGTAGTTGGAGGATGGCTTTTACTGTGATTAATTGTGCTCGATTTCTTGATACTTTGTCGAAGAAAGTTTGCGAAAACAAGAATACTATCGTTCGCTCTCTCTCATATGTGGCCATTGACGTGGAGCTCGATCGGGATCCACAAATTCCTATTGTTTCTGCTGATCGGAAAACCCTAGGCGACATGGTGAGGGAGAAGAGATCTGATGTGTTGAATCAGTTCGGAGGTGTAAATGGTTTGGCTGCGATTCTTGAAACTGACGTTATAAAAGGAGTTCCCGGTACTGAGACTGATCTTGCTCTAAGGAAGAGTAGTTTTGGTTCGAATACGTTCGAGAAACCACCCGCCAAAGTTTTTTTGAAATTTGTTCTTGAAGCGTTGAGCGATACGACGATCATTATTCTCTTATTCTGCGCAACTTTTGCTCTCGTCTTCGGAATCAATGAGGACGGTTTGGGCGATGGATGGTTTAACGGCGGGAGTATCATGTTCACCCTCTTTCTCGTTGTCATAATCTCTTCCACAAGTAACTACAACCAATCTCGACAGTTCGTGAAGCTTTCGGCCAAGAGCGGCGACATAAAGGTCGAAGTGGTGAGAGGAGGACGGAGGCAATTCATCTCCATCTTCGACGTTGTGGTGGGCGATCTCGTGTGTTTGAATATCGGAGGTCAAGTACCTGCAGATGGATTGTGCTTGGAAGGAACTCCGTTAATGGTGGACGAGTCGAGCATGACAGGGGAGAGTGATCATGTGGAGGTCAATCACATCAATAATCCTTTCTTGCTATCTGGGACAAAGGTAATGGATGGCTGTGGCATGATGCTAGTCACTTCTGTCGGGATGAACACAGCCTGGGGCGAGATGATGAGCTCGGTAAGCGGTGAAGTGAATGAGGAAACTCCCTTGCAAGTGCGTCTCAACAAAATGGCATCTTACATAGGAAAAATTGGCCGCACTGTCGCCGTATGTGTTCTATTTGTTCGATCTATCCGTTATTTTACTGGGCACACCAGAGATGAGAAGGGAAATCAGGAATTTAACGGAAAAAAGACGAAATTTGACGATGTGATGAATGCTGTAATCGGAATCATCTTCGAATCTGTGATGATTGTTGCTGCGGATGTCCCAGATGGTTTGCCTCTGGCTTTTACTTTGACTCTTGCATATTCAAAGAAGATGATGAGAGACAATGCCATGGTGAGAAAACTATCTGCATGTGAGACAATGGGGTCAGCCACGACAATATGCACAGACAAAACTGGCACGCTTACTCTTAACGAGATGAAAGTTACAAAGTTTTGGCTCGGAAAAAAAGAGATGAAGGAGGATACCTCGAATATAGCTGCCAATATTCTCCGATTGCTGCAACAAGCCATTGGTCTAAACACTACTGGAAATGTTCATAGACAGACTTGTTCTTCACCTCCTGAGATTTCTGGCAGCCCAACAGAGAAGGCTTTACTTCTTTGGGCAGTGACCGAGCTGGATATGAACATTGATGAACTGAAGAAATGTAATGAAATTATCCACGTGGAGACCTTCAATTCAGAGAAAAAAAGAAGTGGAATTTTGATTTGGAACAATGAGAAGAAGACTCAGACTCACTGGAAAGGAGCTGCTGAGATGATACTAGCAATGTGTTCGCATTATTATGATACGGCGGGGACAGTAACAGCCATTGACGACGAGGAAAGAAGACAGCTTGATACAATTATAGCGAACATGGCAGGGAAAAGCTTACGATGCATAGCCTTTGCTTGCAAGAAAGCTGAAGAAGAAAATGGCAATGTTCACCTCAACGAATCCGGTTTGATTTTACTAGGAATTGCGGGTTTGAAAGATCCATGTCAAGGAGTTAAAACAGCCATTGAAGCTTGCAAAGCTGCAGGAGTGAATATCAAAATGATCACAGGTGATAATGTGCATACAGCCAGGGCAATAGCCATTGAATGTGGTATACTCAATATCAATGAAAGTCTAGACATTGATGCTGTGATAGAAGGATCTCAATTTAGAAATTACACACCAGAAGAGAGAATGGAGAAGATTGACAAAATCAAAGTAATGGCTCGATCCTCCCCGGTCGACAAGCTGCAGATGGTGCAGAGCTTGAAGGAGAAAGGCCACGTCGTAGCAGTCATGGGCAACGGAACAGACGACGCTCCGGCCTTAAAAGAGGCAGATATTGGACTTTCTATGGGAATTCAAGACACTCAAGAGAGCTCGGATATAGTAATTATGGACGACAATTTCACATCTGTGATGACAGTTTTGAGGTGGGGAAGATGTGTTTATAACAACATTCGGAAATTCATCCAATTCCAGCTCACCTTCAATGTCGCCACCCTCGCAATCAACTTCGTCGCAGCTTTATCTTTCGGAGAAGTCCCTCTAACATCATTTCAGCTCCTGTGGGTGAATCTCATAATGGACACTCTAGGAGCTTTAGCTCTGGCCACCGAACAACCAAGTGACGATCTCATGGAAACCCCGCCGGTCGGACGAACCGAGCCGTTGATCACCCGAGTCATGTGGAGAAACCTCATTGCTCAGGCCCTTTACCAAGTAACCGTCTTCCTAGTCTTAGAATTCAAGGGAAGATCCATCTTCAACGTGAACGAAGCTGTCAAGAACACACTCATTTTCAACACCTTCGTCCTCTGCCAAATCTTTAACGAGTTCAACGCAAGGAAGCTGGAGAAGAAGAACATATTCAAAGGGCTACATAAAAATAAGCTCTTTTTATTCATTGTTGGAATCACCATTGTTCTTCAACTGGTAATGGTTGAGTGCTTGAAGAAGTTTGCTGACACAGAGAGGCTGAATTGGGGCCAGTGGGGTGCTTGCACGGGCATCGCCGCATTATCTTGGCCGATCGGGTGGTTGGTCAAATGCATAACCATTTCAGGCATGTAG 2997 44.81 MALRFRKHGEVAFADCERYSGAKNHRRSWRMAFTVINCARFLDTLSKKVCENKNTIVRSLSYVAIDVELDRDPQIPIVSADRKTLGDMVREKRSDVLNQFGGVNGLAAILETDVIKGVPGTETDLALRKSSFGSNTFEKPPAKVFLKFVLEALSDTTIIILLFCATFALVFGINEDGLGDGWFNGGSIMFTLFLVVIISSTSNYNQSRQFVKLSAKSGDIKVEVVRGGRRQFISIFDVVVGDLVCLNIGGQVPADGLCLEGTPLMVDESSMTGESDHVEVNHINNPFLLSGTKVMDGCGMMLVTSVGMNTAWGEMMSSVSGEVNEETPLQVRLNKMASYIGKIGRTVAVCVLFVRSIRYFTGHTRDEKGNQEFNGKKTKFDDVMNAVIGIIFESVMIVAADVPDGLPLAFTLTLAYSKKMMRDNAMVRKLSACETMGSATTICTDKTGTLTLNEMKVTKFWLGKKEMKEDTSNIAANILRLLQQAIGLNTTGNVHRQTCSSPPEISGSPTEKALLLWAVTELDMNIDELKKCNEIIHVETFNSEKKRSGILIWNNEKKTQTHWKGAAEMILAMCSHYYDTAGTVTAIDDEERRQLDTIIANMAGKSLRCIAFACKKAEEENGNVHLNESGLILLGIAGLKDPCQGVKTAIEACKAAGVNIKMITGDNVHTARAIAIECGILNINESLDIDAVIEGSQFRNYTPEERMEKIDKIKVMARSSPVDKLQMVQSLKEKGHVVAVMGNGTDDAPALKEADIGLSMGIQDTQESSDIVIMDDNFTSVMTVLRWGRCVYNNIRKFIQFQLTFNVATLAINFVAALSFGEVPLTSFQLLWVNLIMDTLGALALATEQPSDDLMETPPVGRTEPLITRVMWRNLIAQALYQVTVFLVLEFKGRSIFNVNEAVKNTLIFNTFVLCQIFNEFNARKLEKKNIFKGLHKNKLFLFIVGITIVLQLVMVECLKKFADTERLNWGQWGACTGIAALSWPIGWLVKCITISGM 998
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 8513273 8516269 + Bma009212.1 Bma13g00451 93180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00451 998 SUPERFAMILY Calcium ATPase, transduction domain A 221 319 IPR008250 -
Bma13g00451 998 Pfam Cation transporter/ATPase, N-terminus 102 167 IPR004014 -
Bma13g00451 998 ProSitePatterns E1-E2 ATPases phosphorylation site. 445 451 IPR018303 -
Bma13g00451 998 PRINTS Sodium/potassium-transporting ATPase signature 436 457 - -
Bma13g00451 998 PRINTS Sodium/potassium-transporting ATPase signature 186 206 - -
Bma13g00451 998 PRINTS Sodium/potassium-transporting ATPase signature 561 579 - -
Bma13g00451 998 Gene3D - 453 642 IPR023299 GO:0000166
Bma13g00451 998 Gene3D - 124 320 - -
Bma13g00451 998 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 449 643 IPR023299 GO:0000166
Bma13g00451 998 PANTHER CATION TRANSPORTING ATPASE 22 986 - -
Bma13g00451 998 PANTHER CALCIUM-TRANSPORTING ATPASE 22 986 - -
Bma13g00451 998 Gene3D - 440 783 IPR023214 -
Bma13g00451 998 Pfam Cation transporting ATPase, C-terminus 823 992 IPR006068 -
Bma13g00451 998 Pfam haloacid dehalogenase-like hydrolase 440 755 - -
Bma13g00451 998 SUPERFAMILY Calcium ATPase, transmembrane domain M 101 994 IPR023298 -
Bma13g00451 998 SUPERFAMILY HAD-like 441 843 IPR036412 -
Bma13g00451 998 PRINTS P-type cation-transporting ATPase superfamily signature 267 281 - -
Bma13g00451 998 PRINTS P-type cation-transporting ATPase superfamily signature 656 666 - -
Bma13g00451 998 PRINTS P-type cation-transporting ATPase superfamily signature 741 760 - -
Bma13g00451 998 PRINTS P-type cation-transporting ATPase superfamily signature 635 646 - -
Bma13g00451 998 PRINTS P-type cation-transporting ATPase superfamily signature 443 457 - -
Bma13g00451 998 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 93 995 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bma13g00451 998 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 712 817 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma13g00451 998 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 387 475 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma13g00451 998 Gene3D - 151 992 - -
Bma13g00451 998 Pfam E1-E2 ATPase 220 422 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00676 Bma-Chr8:41790995 Bma13g00451 Bma-Chr13:8513273 4.34E-60 dispersed
Bma13g00451 Bma-Chr13:8513273 Bma15g00618 Bma-Chr15:7843658 0 dispersed
Bma13g00451 Bma-Chr13:8513273 Bma13g00456 Bma-Chr13:8604370 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00451 K01537 - qsu:111999849 1327.0