Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma13g00510 | ATGGATAACCCGCTTCCCAAAACCCCCGATTCCTCTGATTTTCGCTCTTTTAACACCCTTAGCGTTAGCCTCTGCAGCACCATTGTTTCGGGCTCGGATTACTCTGCCCCAAGTGCGAGTTTCAGCAGCAACATGAGCAACCTCACTGTTGAATCTCCGACAAACGATAAAGCCGTTTCAGATTGTGAAGAAGGCGAATCCAATTCTTTTGACGATAACAAATTCAATTCTAGGAGCTCTTATCCGTCCAAGCCCCACAGAGGCAACGATATTCGATGGGAGGCGATTCGACGGACGAAAGCAAAAGATGGAGATTTAAACTTCGGCCATTTCAGGCTTTTGAAGAAGCTTGGATTTGGAGACATTGGAAGTGTGTATCTGGCAGAACTGAGAGGAATACGCAGCCTTTTTGCCATGAAGGTTATGGATAAAAGAATGCTGATTGAGAGGAGGAAGATGGGTAGAGCACAAACGGAGAGAGACATACTGGGTTTGCTAGATCATCCTTTTCTACCAACCCTTTACTCCCATTTCGAAACCGACAAATTTTCTTGCTTGTTAATGGAGTTTTGCAGTGGTGGGGATCTTCACACGCTCAGGCAACGCCAGCCTTCCAAGCATTTTTCAGAGCAAGCGGCCAGGTTTTACGCCTCGGAAGTTCTTCTTGCTCTGGAGTATCTTCACATGATGGGAGTTGTTTACAGAGACTTGAAACCAGAAAATGTGTTAGTCAGAGAAGATGGTCACATCATGCTTTCAGATTTTGATTTATCATTGCAATGCTACGTTAATCCAACTCTCGTTCAATCCAATCCAACCTCCGCTTGCGCAATTTCTGCAGCCTGCAAATTACCCATTTGCGTCCACTCATCTTCCTGCCTGCAACCTTCTTGCTTGAAGCCTATCACATTTCTCAAATCAAACAAGATAAAACGTGATCATAAAATGATCAGCTTTTCACATTCAGATTCGCTCCCCCAACTCATAGCCGAGCCTACTTCAGCTAGATCGACGTCTTTTGTCGGAACCCATGAGTACTTGGCTCCGGAGATTATCCGAGGAGACGGCCATGGCAGCGCAGTAGATTGGTGGACATTTGGGATCTTCTTGTACGAATTATTACATGGCAAAACGCCATTCAAAGGGAATGGAAATAGAGAAACCTTGTTCAACGTGATTGGACAGTCGCTCAAATTTCCAGAAGGGAACAGTATTAGCTATGCTGCTAAAGATTTGATCAGAACTTTGCTGGAGAAGGACCCGAAAAAGCGGCTGGGATTCAAAAGGGGCGCGGCGGAGATAAAACAGCATCCATTTTTTCACGGCGTGAACTGGGCTCTCATTCGCAGTTCTTCCCCTCCTGAAATTCTGAGACCAGTTCATCTTCCATTGTTGAACCTCAAGCTGAAATCTCCTTCCCCTCTTCCGTCCAACGACAGCAAGGGAGCATCTGATTCAGACAGCTCCTCCTCGGGTTCTTACTTAGAATTTGAGTTTTTCTAG | 1503 | 45.64 | MDNPLPKTPDSSDFRSFNTLSVSLCSTIVSGSDYSAPSASFSSNMSNLTVESPTNDKAVSDCEEGESNSFDDNKFNSRSSYPSKPHRGNDIRWEAIRRTKAKDGDLNFGHFRLLKKLGFGDIGSVYLAELRGIRSLFAMKVMDKRMLIERRKMGRAQTERDILGLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPSKHFSEQAARFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLQCYVNPTLVQSNPTSACAISAACKLPICVHSSSCLQPSCLKPITFLKSNKIKRDHKMISFSHSDSLPQLIAEPTSARSTSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFLYELLHGKTPFKGNGNRETLFNVIGQSLKFPEGNSISYAAKDLIRTLLEKDPKKRLGFKRGAAEIKQHPFFHGVNWALIRSSSPPEILRPVHLPLLNLKLKSPSPLPSNDSKGASDSDSSSSGSYLEFEFF | 500 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 9806958 | 9808549 | + | Bma009294.1 | Bma13g00510 | 93239 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma13g00510 | 500 | Gene3D | Transferase(Phosphotransferase) domain 1 | 334 | 456 | - | - | |
Bma13g00510 | 500 | MobiDBLite | consensus disorder prediction | 471 | 500 | - | - | |
Bma13g00510 | 500 | Pfam | Protein kinase domain | 112 | 264 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma13g00510 | 500 | Pfam | Protein kinase domain | 330 | 440 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma13g00510 | 500 | PANTHER | PROTEIN KINASE | 18 | 500 | - | - | |
Bma13g00510 | 500 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 232 | 244 | IPR008271 | GO:0004672|GO:0006468 | |
Bma13g00510 | 500 | Gene3D | Phosphorylase Kinase; domain 1 | 110 | 190 | - | - | |
Bma13g00510 | 500 | CDD | STKc_phototropin_like | 110 | 459 | - | - | |
Bma13g00510 | 500 | SMART | serkin_6 | 111 | 440 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma13g00510 | 500 | PANTHER | FLIPPASE KINASE 1-RELATED | 18 | 500 | - | - | |
Bma13g00510 | 500 | MobiDBLite | consensus disorder prediction | 470 | 500 | - | - | |
Bma13g00510 | 500 | SUPERFAMILY | Protein kinase-like (PK-like) | 83 | 469 | IPR011009 | - | |
Bma13g00510 | 500 | MobiDBLite | consensus disorder prediction | 34 | 88 | - | - | |
Bma13g00510 | 500 | Gene3D | Transferase(Phosphotransferase) domain 1 | 191 | 260 | - | - | |
Bma13g00510 | 500 | MobiDBLite | consensus disorder prediction | 34 | 56 | - | - | |
Bma13g00510 | 500 | MobiDBLite | consensus disorder prediction | 57 | 71 | - | - | |
Bma13g00510 | 500 | ProSiteProfiles | Protein kinase domain profile. | 111 | 440 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00424 | Bma-Chr1:3538782 | Bma13g00510 | Bma-Chr13:9806958 | 2.12E-134 | dispersed | |
Bma13g00510 | Bma-Chr13:9806958 | Bma13g01124 | Bma-Chr13:44342261 | 0 | dispersed | |
Bma13g00510 | Bma-Chr13:9806958 | Bma14g00904 | Bma-Chr14:10219310 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66847 | PF00069 | Pkinase | 6.10E-37 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma13g00510 | K08286 | - | qsu:112027816 | 647.891 |