Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00525 ATGGAACACCTTGTGGAGCATATGAGAATCTCATATCACTCAGTTCATGAACCCTCATGTGGCGTTTGCAATAAACATTGTAGATCTTTTGAGTCTCTTAGAGAACATCTCATAGGTCCACTGCCAAAACAAGAATGCAAAAACATATTCAGCGTACGAGGTTGCAAGTTCTGCTTATCCATTCTTGATAGCCCTTATGCTTTAAGGGTTCACCAAGATAGGTGTCAACTCTCTGGCGTAAACGCTGTAATAATAACCAACAAACTAATACTCGATAATTTCATGCGGAGAAATAACTTGGGTACGGAGGATGGGAGAACAAAAGGGCCAGACGTCGTGGCATTGGCATGCAAAATGGTTGGTGGCGGCAGTGATTCCTCCATAGATATCTGTGCAAGAGTCTGCCTCATTGATGAAAATGAAACAATACTCTTCCAATCTTATGTGAAACCAATCATCCCTATCACTAACTATAGGTATGAATCAACGGGTATTCGTCCGGAGCATTTGAGGGATGCCATGGGACTGAGGCAAGTGCAGAAGAAAGTTCAAGACTTTCTCTGCAATGGGGAACCCATGTGGAAGATTCGACCCAGGAGTGGAAAAGCAAGGATTCTAGTGGGTCATGGTTTGGATAATGATCTTGATGGTTTGCAAATAGAATATCCATCCCTAATGATCAGGGATACTGCAAAATATCCTCCATTAATGAAAACAAGCAAGCTCAGTAATTCGCTCAAGTACTTGACTCAAGCATATCTAGGGTATGATATTCAGAATGGAATACAAGAACCGTACGAGGAGTGTGTCGCAGCCATGAGACTTTACATGAGAATGAGGAGCCAAGCTCACAAGACAGAGAACCACCCATTTCCATCTGACCAACAAAGTAGGAATAATTTTGCAGTTTGGAGACAGAATGAGCTGGAAAAAATGACTCCTGAACAGATGCTCGATATTTCAAGGTCTGATTATTACTGTTGGTGCTTGGATTTGAAGGGTTAA 1005 41.99 MEHLVEHMRISYHSVHEPSCGVCNKHCRSFESLREHLIGPLPKQECKNIFSVRGCKFCLSILDSPYALRVHQDRCQLSGVNAVIITNKLILDNFMRRNNLGTEDGRTKGPDVVALACKMVGGGSDSSIDICARVCLIDENETILFQSYVKPIIPITNYRYESTGIRPEHLRDAMGLRQVQKKVQDFLCNGEPMWKIRPRSGKARILVGHGLDNDLDGLQIEYPSLMIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQNGIQEPYEECVAAMRLYMRMRSQAHKTENHPFPSDQQSRNNFAVWRQNELEKMTPEQMLDISRSDYYCWCLDLKG 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 10599674 10601096 - Bma009321.1 Bma13g00525 93254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00525 334 SUPERFAMILY Ribonuclease H-like 124 281 IPR012337 -
Bma13g00525 334 Pfam Exonuclease 124 253 IPR013520 -
Bma13g00525 334 CDD REX4_like 113 276 IPR037431 GO:0006364|GO:0008408
Bma13g00525 334 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 1 331 - -
Bma13g00525 334 SMART exoiiiendus 111 285 IPR013520 -
Bma13g00525 334 PANTHER OS02G0709000 PROTEIN 1 331 - -
Bma13g00525 334 Gene3D - 109 299 IPR036397 GO:0003676
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00515 Bma-Chr13:10066887 Bma13g00525 Bma-Chr13:10599674 0 dispersed
Bma13g00525 Bma-Chr13:10599674 Bma14g00265 Bma-Chr14:3110448 7.01E-29 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00525 - - qsu:111996861 552.362