Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00585 ATGATTATTGGGAGTGTAAGAGGACAGCTAGACCAGAACTTCTACAGCTCAAGCTGCCCAAACTTGGAACAAATAGTCAAGCAGGCAGTTCAGACAAAGCTTAGCCAGACTCCCATTACAATCCCATCAACGCTTAGACTCTTTTTTCATGACTGCTTCGTCGAGGGATGTGATGCTTCAATCATGATATCATCGCTGAACCGAGACGCAGAGAAGGATGCGCAAGACAATCTTTCGCTTGCCGGAGATGGGTTCGACACTGTTATAAAGGCCAAACAATCTGTGGAGACAGCATGTCCTTCCATAGTCTCCTGCTCCGACGTATTAGCCATCGCCGCAAGGGATGTTGTCGTGTTGGCAGGAGGCCCCAGTTTCAGTGTTGAATTGGGACGTCGAGATGGATTAATCTCTCAGGCATCACGGGTGGCCGGAAAGTTACCGGAACCGAGCTTTGATCTCAGCCAACTCACCACCCTTTTCGCCAAAAACAATCTAACACAAACTGATATGATTGCACTGTCAGGAGCGCATACGATCGGAGCTTCTCACTGTGGCAAATTCTCCAACCGGCTGTACTCATTTTCGCCATCGTCTCCGGTGGATCCTTCTTTGGACCCAAATTATGCTCAGCAGTTAATGGCATCTTGCCCTAAGAATGGAGACCCCAACTCTGTAGTGACTATGGACCCTGTTACGCCAAACTCTTTTGACAATGTCTACTTCCAGAATCTTGTGAATAAGAAGGGCCTGCTCTCTTCTGATCAAGTGCTATTCACTGAGTCTGCAAGTAACCCTACTGTCACTGGTTTTGCCAACAATCCTGGTGACTTTGCCAATGCTTTCATCGCTGCCATGAAGAAGCTTGGGAGAGTTGGAGTTAAGACTGGTAGCTTAGGGGAGATCAGAAAAGACTGCACAACCTTAATTCATGATCATGATGTTTTTACCTTAAATAAATGA 960 46.77 MIIGSVRGQLDQNFYSSSCPNLEQIVKQAVQTKLSQTPITIPSTLRLFFHDCFVEGCDASIMISSLNRDAEKDAQDNLSLAGDGFDTVIKAKQSVETACPSIVSCSDVLAIAARDVVVLAGGPSFSVELGRRDGLISQASRVAGKLPEPSFDLSQLTTLFAKNNLTQTDMIALSGAHTIGASHCGKFSNRLYSFSPSSPVDPSLDPNYAQQLMASCPKNGDPNSVVTMDPVTPNSFDNVYFQNLVNKKGLLSSDQVLFTESASNPTVTGFANNPGDFANAFIAAMKKLGRVGVKTGSLGEIRKDCTTLIHDHDVFTLNK 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 12757631 12759007 + Bma009414.1 Bma13g00585 93314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00585 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 169 179 IPR019793 -
Bma13g00585 319 PRINTS Plant peroxidase signature 168 180 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma13g00585 319 PRINTS Plant peroxidase signature 43 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma13g00585 319 PRINTS Plant peroxidase signature 283 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma13g00585 319 PRINTS Plant peroxidase signature 83 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma13g00585 319 PRINTS Plant peroxidase signature 227 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma13g00585 319 PRINTS Plant peroxidase signature 243 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma13g00585 319 PRINTS Plant peroxidase signature 19 38 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma13g00585 319 PRINTS Plant peroxidase signature 102 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma13g00585 319 PRINTS Plant peroxidase signature 121 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma13g00585 319 PANTHER PEROXIDASE 1 308 - -
Bma13g00585 319 PANTHER - 1 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma13g00585 319 Gene3D - 14 306 - -
Bma13g00585 319 Pfam Peroxidase 26 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma13g00585 319 Gene3D Peroxidase, domain 2 147 288 - -
Bma13g00585 319 SUPERFAMILY Heme-dependent peroxidases 9 307 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma13g00585 319 PRINTS Haem peroxidase superfamily signature 229 244 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma13g00585 319 PRINTS Haem peroxidase superfamily signature 103 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma13g00585 319 PRINTS Haem peroxidase superfamily signature 169 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma13g00585 319 PRINTS Haem peroxidase superfamily signature 41 55 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma13g00585 319 PRINTS Haem peroxidase superfamily signature 121 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma13g00585 319 CDD secretory_peroxidase 9 305 IPR033905 GO:0004601|GO:0042744
Bma13g00585 319 ProSiteProfiles Plant heme peroxidase family profile. 9 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00182 Bma-Chr8:2227738 Bma13g00585 Bma-Chr13:12757631 1.49E-92 dispersed
Bma09g00008 Bma-Chr9:303810 Bma13g00585 Bma-Chr13:12757631 8.54E-137 dispersed
Bma13g00585 Bma-Chr13:12757631 Bma08g01042 Bma-Chr8:49536459 3.93E-81 dispersed
Bma14g01008 Bma-Chr14:11711893 Bma13g00585 Bma-Chr13:12757631 5.78E-70 dispersed
Bma13g00585 Bma-Chr13:12757631 Bma01g00558 Bma-Chr1:4896111 1.91E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00585 K00430 - qsu:111984930 466.463